Arabidopsis lyrata (lyrate rockcress): 9302381
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Entry
9302381 CDS
T01578
Name
(RefSeq) neutral ceramidase isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00600
Sphingolipid metabolism
aly01100
Metabolic pathways
Module
aly_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
9302381
Enzymes [BR:
aly01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
9302381
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Paralog
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
9302381
NCBI-ProteinID:
XP_020889556
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All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MTRRSVSMHCTLFLLFLLKIICVFSDSDYLIGLGSYDITGPAADVNMMGYANMEQVTSGV
HFRLRARAFIVAEPYKKRIAFVNLDAGMASQLVTIKVIERLKQRYGELYTEENVAISGTH
THAGPGGYLQYILYLVTSLGFVHQSFNVLVDGIEKSIIQAHENLRPGSILINKGELLEAG
VNRSPSAYLNNPAHERSKYEYDVDKEMTLVKFVDDQWGPVGSFNWFATHGTSMSRTNSLI
SGDNKGTAARLMEDWFEQKDCRASNDFESHRRVSSIITDPHGEYQDLMEMASSLLSTGGK
TVTKMSSVAKRVRSGFRHADKPIFVSAFCQTNCGDVSPNVLGAFCIDTGLPCDFNHSTCG
GKNEQCYGHGPGYPDEVESTRLIGERQFKKAADLFTKASEEIQGKVDYRHAFVDFSQLEV
TINGQNGGSKVVKTCPAAMGFGFAAGTTDGPGAFDFKQGDDQGNPFWRLVRNLLKNPTEE
QARCQRPKPILLDTGEMKQPYDWAPSILPVQILCIGQLVILCVPGEFTTMAGRRLRDAVK
TVLKEGSNGGEFSVVIAGLTNSYSQYIATFEEYQVQRYEGASTLYGPHTLSGYIQEFKKL
ANDLLSGQTTDPGPQPPDLLQKQISLLTPVVADMTPIGTKFGDVISDVPRFSKFKKGTDV
VTVQFRSANPRNDLMTEGTFALVERWLEGRETWVPVYDDDDFCLRFKWSRPFKLSTQSTA
TIEWRIPETASPGVYRTTHFGSAKTPISSIHHFSGSSSAFVVY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggcggtctgtgtctatgcactgcacattgttcttgctatttctgttgaagatc
atatgtgtattttcggattccgattatttgatcggtcttggaagctatgacatcacggga
cctgcagctgatgtcaacatgatgggatatgctaacatggaacaagtaacatccggtgtt
cacttcaggcttagagctcgcgcgttcatcgtggctgagccatacaagaaaaggattgct
tttgttaatcttgatgctggtatggcctcacagcttgtgacaatcaaagtgattgaaaga
ttgaaacagaggtacggtgagctttatactgaggaaaatgttgcaattagtggaactcat
actcatgctggcccagggggttatctccaatacattctgtacttagttacatctctcggg
tttgttcatcagtcgttcaatgttcttgtggacggtatagagaaaagtatcatacaagct
catgaaaacctccgtcccgggtccattttaatcaacaaaggggagctcttggaagctggt
gtgaaccgtagtcccagcgcataccttaacaatccggcacatgaacgtagtaaatatgaa
tatgatgtcgataaagagatgacacttgtcaagttcgttgatgatcaatggggtccagtg
ggtagtttcaattggtttgcaactcatggcacttcgatgagccgtacaaattccttgatc
agtggggacaacaaaggcactgcagcacgtctcatggaagactggtttgaacaaaaagac
tgccgcgcatcaaatgattttgaatctcatagaagggtctcaagcataatcacagatcct
catggtgagtatcaagatttgatggaaatggcatcctcgttactgtctacaggcggtaaa
accgttacaaagatgtcaagcgttgctaagcgggtcagaagtggattcagacacgctgac
aaacctatctttgtctctgccttctgtcaaactaactgcggtgatgttagtccgaacgtg
ttgggagcattctgtatagacacaggccttccttgtgacttcaaccacagtacttgtggt
ggaaagaatgaacagtgctacggccatggaccaggctaccctgatgaagttgagagtacg
cgccttattggagagaggcagttcaagaaggctgcggatcttttcactaaagcctctgag
gagatacaaggaaaagtcgactatcgtcatgcatttgttgatttctctcagcttgaagtg
acgattaatggacaaaatggaggttccaaagttgtgaaaacatgtccagctgcaatgggt
tttggttttgctgcaggaacaactgatggacctggagcatttgactttaaacaaggagat
gatcagggaaatcctttctggaggcttgtaaggaaccttctcaagaatccaactgaagaa
caggcccggtgccagcgacctaaacccatattgcttgataccggtgaaatgaaacaacca
tacgactgggcgccgtcgatattaccagttcagatcctctgtattggccagctagtgatt
ctctgcgtccccggagaattcacaacaatggcagggaggcgactccgggatgctgtgaaa
acagtgcttaaggaaggcagcaacggaggagaatttagcgtggtcatagctgggctaacc
aattcgtactcgcagtatatcgccacatttgaggaataccaagttcagagatatgagggt
gcatcgactttgtatggacctcacacgctaagcggatacattcaagagttcaagaaacta
gcaaatgatcttctatctggccaaaccacagacccggggccgcagccacccgacctactt
cagaagcaaataagcttactaacacctgtggttgcggatatgacaccaattggaactaaa
tttggagatgtcatatcggatgttcctcggttttccaaatttaaaaagggaactgacgta
gtgacggttcaattccggtcagctaacccgagaaatgatctgatgacagaagggactttt
gcgcttgttgagaggtggctcgagggaagagagacatgggtacccgtttacgatgacgac
gacttttgcctccggtttaagtggtcaagaccgttcaaactcagcacgcagagcacagcg
actatcgaatggagaatccctgaaaccgcatcacctggtgtatatagaaccactcacttt
ggttcagctaaaacacctataagctccattcaccatttctctggttcatctagtgccttt
gttgtatattga
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