Arabidopsis lyrata (lyrate rockcress): 9302420
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Entry
9302420 CDS
T01578
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00740
Riboflavin metabolism
aly00790
Folate biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
9302420
00790 Folate biosynthesis
9302420
Enzymes [BR:
aly01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
9302420
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
9302420
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GFIT
Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
9302420
NCBI-ProteinID:
XP_002864650
UniProt:
D7MSI0
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MMDSALYHHPRIFFAHSFINGSYRSPRFANTCWRLTDGSRWNIKASENSDRNVFDESPLR
GTDESLFDSVDAEITPETDDFFVSDAEGDPDCPSQGYSSIEFALQTLRKGKFVIVVDDEN
GDVEGNLIMAATLTSPKDIAFLIKNGSGIVSVGMKKEDLERLSLTLMSPEMEDEDSSAPT
FTVTVDAKSGTSTGVSASDRAMTVLALSSLEAKPDDFRRPGHVFPLKYRDGGVLRRAGHT
EASVDLMILAGLRPVSVLSAILDQEDGSMASLPYMKKLATEHDIPIVSLTDLIRYRRKRD
KLVERITVSRLPTKWGLFQAYCYRSKLDGTENIALVKGNVGNGEDILVRVHSECLTGDIF
GSARCDCGNQLDLAMELIEKEGRGVVVYLRGHEGRGIGLGHKLRAYNLQDEGHDTVQANV
ELGLSIDSREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVVTPITKEN
RRYMETKRKKMGHIYISDNNDQPLA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatggattctgctttatatcatcatcctcgaatctttttcgctcacagcttcatcaat
ggctcgtataggtctcctaggtttgctaatacttgctggagattgactgatggttcacgt
tggaatatcaaggctagtgagaatagtgatcgcaacgtgtttgatgaaagtcctctgaga
ggaaccgacgagtcgttgtttgattctgttgacgcggaaatcacacctgagactgatgat
ttctttgtgagtgacgcagagggtgatccagattgtccttctcaaggttattcctctatt
gaatttgctctgcaaactttacgcaaaggaaagtttgtgatcgttgttgacgatgaaaat
ggggatgttgaagggaatctgattatggcggcaactctaacgagtccaaaagacatagcc
tttctgattaagaatggttctgggattgtctcagttgggatgaagaaagaagaccttgaa
agattaagccttacactcatgtcacctgaaatggaagacgaagactcctctgctccaaca
ttcacggtcactgtggatgcaaaatccggaacatcaactggagtatcagcttcagacagg
gcgatgacggttcttgcactttcgtctctggaagctaaaccagatgatttcaggaggcct
ggtcatgtattccctctcaagtacagagatggtggagttttaaggagagctggtcacact
gaagcttcagtggatctaatgatattggctggtttacgtcctgtctctgttctttcagct
attcttgatcaagaagatgggtcaatggcttcactaccatatatgaaaaagcttgctaca
gaacacgacattcccattgtatcgttgactgatctaatcagatatcgaagaaagcgcgat
aagcttgtggagagaatcacagtgtctcgtttgcctaccaaatggggtcttttccaagct
tattgttatcgatctaaactcgatggaaccgaaaatattgccctcgttaagggaaatgtc
ggaaatggtgaggacattctggtacgagtgcattcagagtgcctaaccggggacattttt
ggctcagcgcggtgtgactgtggaaaccaattagatttagccatggagctaatcgagaaa
gagggaagaggagtcgttgtgtatcttcgtggccacgaaggaagaggcattggccttggt
cacaagcttagagcttataacttgcaggacgaaggacacgacactgttcaggccaatgtt
gaactgggcctatccattgattctcgtgaatatggtatcggtgctcagatgcttcgagac
ataggagtaagaacaatgagactgatgacgaataaccccgcaaagttcaccggtctgaaa
gggtacggactcgctgtagttggccgtgtgccggtggtgacaccaatcaccaaggagaac
agaagatatatggagaccaaacgcaagaagatgggtcacatttatatctctgataacaac
gatcagcctttggcttga
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