Arabidopsis lyrata (lyrate rockcress): 9302434
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Entry
9302434 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9302434 isoform X1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9302434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9302434
03016 Transfer RNA biogenesis [BR:
aly03016
]
9302434
03029 Mitochondrial biogenesis [BR:
aly03029
]
9302434
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
9302434
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
9302434
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
9302434
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
9302434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
9302434
NCBI-ProteinID:
XP_020871576
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MGFFDLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDKDYCT
IPLLTLGSLIKVAPRLASSVGFHRDLLGVPRATPFRQYTRLTVHVESNAQCQSLNSGNPI
LKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQRGIYFEIKY
SDLLMDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDIINLMCLLGLSSQR
ARAAISKNCRNMIAKVLKKKRFHKEAVRVELLSSGDTFSLGQPLSEDCMKWDPLSSGEGD
MLLDDLAKAFDATNAVAHKSSKAIDFTSVLDGLPTHGFRVKDIVGTEPLTQSPAAKVIDA
PEHSNQVSELRTAVAASSDDNLGEIETISQIETQISEDESKVEPTTNVLKEEAFALRKCS
ASHGQGILLQNQTAASFTLIRCTKSDAASDVSMHIESTSEGGSMSPSKSDHGISQSPVEV
INMGKFAFDEEASVDENSKERVTTGPASLDEMHITEPGHHASIDDEQHIAEPEHNTSIAD
EIKIDCSSEANHDEYMEVTLKDQKHETGDSNINLPNLSSETTDLLSKSGKPLSPEAVVQD
HDEASRLESNETKLEEEPSVPYHNTFEITMEDNKVAELTIEDEKKGKTETDTNHQGQVQS
SENNNDTKSGKTQAKRSRVRLQPFKPFLLQSRFKRISKKRKHRRA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggggttcttcgatctaagcattccatacaatgagccgccgcgatcaggcggtaaggaa
atcgccggcgggaaaaccttacgattaaagctcgccacgaaagccatggaactgggctat
gttgggatcgcacataatcgttcgatcaaaggcgtaatgtctgacaaagactattgtacg
atccctcttctcactcttggatctcttatcaaagtcgctccgcggttagcttcctctgtt
ggattccatcgcgatttactcggtgtcccccgagctactccgtttcggcagtacacgcgt
ctcaccgttcatgtggagagtaatgctcaatgtcagagtttgaattctgggaatccgatt
ctaaagagctacgatattattgctgttagaccgatgaatcagaacgctttcgattatgcc
tgtgagaaagctgaggttgatctaatttcgattgattttacggacaagatgttattccga
ttgaagcatcccatggttaaagctgctattcagcgagggatttactttgagatcaagtac
tctgatctcctaatggatgcacaaacgaggagacaagttatatcaaatgctaagttactg
gtggattggactagagggaagaatctaattatatcaagtggtgctccttcagtcacagaa
cttagaggtccaaacgatatcataaatctcatgtgtttacttggactctcttctcaaaga
gctagagctgccatttcaaaaaattgtaggaatatgatagccaaggttttaaagaaaaaa
cggtttcacaaagaagctgtcagggttgaattactttcttctggtgatacctttagcctc
ggacagcctctgtctgaagattgcatgaaatgggatcccctctcgagcggtgaaggtgac
atgcttttagatgatcttgcaaaggcttttgatgccacaaatgctgtggcgcacaaatca
tctaaggcgatagatttcacctctgttcttgatggcttgccaacacatggtttccgggtt
aaggatattgtaggaactgaaccattgactcagtctcctgcagctaaggtaattgacgca
ccggagcacagtaatcaagtttctgaactacgtacggccgtggcagcttcatctgatgat
aatcttggggaaattgaaacaataagccaaattgaaacgcaaatatctgaagatgaaagt
aaggtggaacctactacaaatgtcctcaaggaagaagcatttgccctaaggaaatgcagt
gccagccatggccaggggattttgttgcaaaatcaaacagctgcttcctttacactgata
agatgtacaaagtcagatgcagcttctgatgttagcatgcatattgagtcgacttccgaa
ggtggatcaatgtcaccatcaaaaagcgatcatgggatctcacaaagtcctgttgaagtg
ataaacatgggaaaatttgcttttgatgaagaagcctcagtggacgagaacagcaaagaa
agagttactaccggtcctgctagtcttgatgagatgcatatcactgagcctggacaccac
gcatccatcgatgatgagcagcatatcgctgagcctgaacacaacacatccattgctgat
gagataaaaattgattgttcttcggaagcaaatcacgacgagtacatggaggtgacactg
aaagaccagaagcatgaaacaggtgacagtaatattaatcttcctaacttatcctctgag
actaccgatttgctaagtaaatcaggtaaacctctcagtccagaggcggttgtacaagac
catgacgaagcatcaagattagagtccaatgagacaaagctcgaggaagagccatcagtt
ccataccacaacacctttgagataacaatggaagacaataaagtcgcagagttaacaatt
gaagacgagaagaaaggaaagactgaaaccgacactaatcaccaaggccaagtccaatcc
tctgagaataacaatgacacaaaatcaggtaagacacaagctaagaggagtagagttcga
ttacagccttttaagccttttctacttcaatcaaggttcaaacggatcagtaaaaaaaga
aaacatcgaagagcttga
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