Arabidopsis lyrata (lyrate rockcress): 9302583
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Entry
9302583 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 11
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9302583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9302583
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9302583
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
9302583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF4428
Trm112p
zf-RING_UBOX
DM
Motif
Other DBs
NCBI-GeneID:
9302583
NCBI-ProteinID:
XP_002864819
UniProt:
D7MMW2
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MEGSNSHSHIQLSKEKISHRQKKQRMEKNETRSAKLLDLDVLDCPICFEPLTIPTFQCDD
GHLVCSFCFAKVSSNRCPGPGCDLPIGNKRCFSMEKVLESAFVPCPNTEFGCTESFSYGK
VSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRSHLYNSTICSSIWGYSSVDVRININ
EKVLVLWESLQKLLFVVQCFRERHGVYVTVRRIAPSASELKKFSYCLSYSIDGHNVTYES
PEVKRLLEVNSQIPDESFMFVPNCLLRGEMLELKLGIKKLMQK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggagggtagcaactctcactcgcatattcaattatcaaaagaaaaaatttcgcaccgg
caaaagaagcaacgtatggagaagaatgaaacacgatcggctaagttgttggatctagat
gttcttgactgtccgatttgcttcgagccgctcactattcctacctttcagtgtgatgat
ggacatctagtttgcagtttttgctttgccaaagtgagtagtaacaggtgccctggtcct
gggtgtgatttacccattggtaacaagcgatgcttctcaatggagaaggttcttgaatca
gcctttgttccatgtccaaatactgagtttggctgcacagagagtttctcttatgggaaa
gtgtcaagtcatgaaaaggaatgcaactactctcaatgctcttgccccaacctcgaatgc
aattacactggctcatacaacatcatctacggtcactttatgcgtagccatctttacaat
agtacgatatgttcctccatatggggatattcctctgttgatgtccggataaacatcaat
gaaaaggttttagttctctgggaatctcttcagaaactattgtttgtggtccagtgtttc
agggagcgacatggtgtttatgttactgttagacgcattgcaccatctgcttcagaatta
aagaagttctcgtattgtctttcgtatagtatagatggacacaatgttacttacgaatca
ccagaagtgaagaggcttcttgaagtaaattctcaaatccctgatgagagtttcatgttt
gtccctaactgtttattgcgtggtgaaatgttggagttgaagcttggcatcaagaagtta
atgcaaaagtaa
DBGET
integrated database retrieval system
