Arabidopsis lyrata (lyrate rockcress): 9302657
Help
Entry
9302657 CDS
T01578
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
aly03410
Base excision repair
aly03420
Nucleotide excision repair
aly03430
Mismatch repair
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9302657
03410 Base excision repair
9302657
03420 Nucleotide excision repair
9302657
03430 Mismatch repair
9302657
03440 Homologous recombination
9302657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9302657
03400 DNA repair and recombination proteins [BR:
aly03400
]
9302657
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
9302657
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
9302657
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
9302657
MMR (mismatch excision repair)
DNA polymerase delta complex
9302657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
9302657
NCBI-ProteinID:
XP_020890385
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MNRAGNSKKRPPPSNTPPAVKHRATGNSTPSPAIGTLDDEFMVDEDVFLDEALLYGDEDE
ESLILRDIEERESRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIISESHKELLPGSSGQA
PIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISKFHQILEGRMRESNKNAKVP
KFVRRIEMVQKRSIMYYQQQESQTFLKITVALPTMVASCRGILDRGLQIDGFGMKSFQTY
ESNIIFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISHAAEGEYS
KMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSCAPIVG
VDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRVK
NSRVRVRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ
KEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISF
LLARGQSIKVLSQLLRKAKQKNLVLPNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDF
ASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPEHVTRTPSGETFVKQSLQKGILPEILEEL
LTARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATNGQLPCLEISSSVTSY
GRQMIEQTKKLVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVSDVEAAMNLGREAAEHIS
GTFIKPIKLEFEKVYFPYLLINKKRYAGLLWTNPQQFDKMDTKGIETVRRDNCLLVKNLV
TESLNKILIDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSAHGELA
ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNNIPIDPNYYLENQISK
PLLRIFEPVLKNASKELLHGSHTRSISITTPSNSGIMKFAKKQLSCVGCKVPISNGTLCA
SCKGREAELYCKNVSQVAELEEVFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRMKAQK
DMAVARQQLDRWSF
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagccggtaattccaaaaagcgaccgcctccttcgaataccccaccggcggtg
aagcatcgagccactggtaattcaacaccatctccggcaatcggaaccctagatgatgaa
tttatggtggacgaggacgtgtttctcgacgaagctctcttgtacggcgacgaagatgag
gaatccctaattctccgggacattgaggagcgtgaatcgcgttcgtcggcttgggctcga
cctccgctctcacccgcttatctctcgaattcccagagtatcattttccaacaattggag
attgactctataatttcggagagtcataaggagctgttaccgggttcctcagggcaagct
ccaatcattaggatgtttggggttaccagagaaggtaacagtgtgtgttgctttgttcat
ggattcgagccctacttttacattgcttgccctcctggaatggggccagacgatatttct
aagttccatcagattcttgagggaaggatgagggaatccaataaaaatgccaaggtcccg
aaatttgttcggcgtatcgaaatggtgcaaaaaagaagtattatgtattaccaacagcaa
gaatcacaaacttttctgaagattacagttgcattgccgactatggtggcaagttgtcgc
ggcatccttgatagaggcttacaaattgatggatttggtatgaagagcttccaaacatat
gagagcaatattattttcgttctccgtttcatggttgactgcgatattgtcggaggaaat
tggattgaagtacctactgggaaatataagaagaatgcaagaactttgtcatactgccaa
ttggagttccattgcctgtactcagatctaatcagtcatgctgcagaaggtgaatactca
aaaatggctccattccgtgtactaagtttcgatattgagtgcgcaggtcgtaaagggcac
tttccggaggctaagcatgatcctgtaatccagatagcgaaccttgttactcttcaggga
gaggatcacccatttgtacgcaatgtcatgactcttaagtcatgtgctccaatcgtaggc
gtagatgtcatgtcttttgaaacagaaagagaggtcttactagcttggagggatttgatt
cgtgatgttgatccggatatcatcattggttataacatctgcaaattcgatttaccttat
ctgattgagagagctgcaacactgggaatagaggaatttcctcttcttggtcgtgtaaag
aacagtagggtccgggtcagggactcaacattttcatcaagacaacaaggaataagggaa
agtaaagagaccacaattgaaggacgatttcagtttgaccttattcaggcaatacacaga
gaccacaaattaagttcttattcgctgaattctgtctcagctcactttctttccgagcag
aaagaggatgtccaccattctataataactgatctccagaatgggaatgcggaaaccagg
agacgtcttgctgtttattgtctgaaggatgcatatctccctcagaggcttctggacaaa
ctgatgtttatatataattatgtcgaaatggctcgtgtaactggtgtccctatttccttt
cttcttgctagaggacagagtatcaaggttctatctcagcttcttaggaaagctaaacag
aagaatctggttcttccaaatgctaaacagtcagggtccgaacaaggaacttacgaaggc
gcaactgttttagaagcaagaacaggtttctatgagaagccaattgcaactttggatttt
gcttcactgtacccgtcaattatgatggcatataatctgtgctactgcaccttggtgaca
cctgaagatgtacgcaaactgaatcttccacctgaacatgtcactagaactccatcaggg
gaaacatttgttaagcaaagtttgcaaaagggtatacttccagaaattctcgaagagctt
cttaccgcccgtaaaagagctaaagcagatttaaaggaggctaaggatcctcttgagaaa
gctgttttagatggtagacagttggcgttgaagatcagtgcaaattctgtctacgggttt
acgggagccactaatgggcagttaccatgcttagaaatatcctcaagtgtaactagctat
ggtcgtcagatgattgaacagacgaagaaacttgtggaagacaaattcacaacattgggt
gggtatgaatacaatgcagaggtcatttatggagacacggattcagtcatggtgcaattt
ggagtatcggatgtagaagctgcaatgaacttggggagggaagctgcagaacatattagc
ggaacttttatcaaacccatcaaattggagtttgaaaaagtctatttcccatatctgctc
attaacaagaagagatatgctggtttgctatggacaaatcctcaacagtttgacaaaatg
gacaccaaaggaatcgagacagtacgaagggataattgtttactggttaagaacctcgtg
actgagagtcttaacaaaatacttattgatagagatgttccaggcgcagctgaaaatgtt
aagaaaaccatttcggatcttctcatgaaccgtattgacttgtcacttttggtgattact
aagggtctaacgaaaacaggagatgattacgaagttaaatcagctcatggtgaacttgct
gaacgcatgcgtaagagggatgctgccacagcgccaaatgttggagatcgagtaccgtat
gttatcataaaagctgctaaaggtgccaaggcttatgaacgatcagaagatccgatctac
gtgctccagaataacatccctatagacccaaattactacttggagaatcagattagcaaa
ccacttcttaggatttttgagccagtcctgaaaaatgctagcaaggagcttcttcatgga
agtcacacgaggtcaatatcaatcactactccttcaaacagcggcataatgaaatttgct
aagaaacaactgagctgtgttggctgcaaagttccgatcagcaatggaacactatgcgca
agttgcaagggaagagaagccgagttatactgcaaaaacgtgtctcaagtggctgagcta
gaagaggtttttgggaggctgtggacccagtgccaggagtgtcaaggctctcttcatcaa
gatgtcttgtgcaccagtcgagattgtccaatattttaccggagaatgaaagcacaaaaa
gacatggctgtagccaggcaacaactcgaccgttggagcttttaa
DBGET
integrated database retrieval system
