Arabidopsis lyrata (lyrate rockcress): 9302695
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Entry
9302695 CDS
T01578
Name
(RefSeq) beta-D-xylosidase 4
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
9302695
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
9302695
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
9302695
NCBI-ProteinID:
XP_002866623
UniProt:
D7MRV5
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MGSSSPLTRRNRAPPSSVSSVFLTFLCFFLYFLDLSNAQSSPVFACDVAANPSLAAYGFC
NTVLKIEYRVADLVARLTLQEKIGFLVSKANGVTRLGIPTYEWWSEALHGVSYIGPGTHF
SSQVPGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGLAGLTYWSPNVNIFRDP
RWGRGQETPGEDPLLASKYASGYVKGLQETDGGDSNRLKVAACCKHYTAYDVDNWKGVER
YSFNAVVTQQDMDDTYQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLLSGVIRGEWK
LNGYIVSDCDSVDVLYKNQHYTKTPAEAAAISILAGLDLNCGSFLGQHTEEAVKSGLVNE
AAIDKAISNNFLTLMRLGFFDGNPKNQIYGGLGPTDVCTSANQELAADAARQGIVLLKNT
GFLPLSPKSIKTLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAGAVSTTYLPGCSNVA
CAVADVAGATKLAATADVTVLLIGADQSIEAESRDRVDLNLPGQQQELVIQVAKAAKGPV
LLVIMSGGGFDITFAKNDPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGRLPMTWYPQS
YVEKVPMTIMNMRPDKSKGYPGRTYRFYTGETVYAFGDGLSYTKFSHSLVKAPSLVSLSL
EENHVCRSSECQSLDAIGPHCENAVSGGGSAFEVQIKVRNGGDREGIHTVFLFTTPPAIH
GSPRKHLLGFEKIRLGKMEEAVVRFKVEVCKDLSVVDEIGKRKIGLGKHLLHVGDLKHSL
SIRI
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcttctccactaacaaggagaaacagagcaccaccgtcctctgtttcctct
gtttttctaacctttctctgtttcttcctctactttttagatttatcaaacgctcaatca
tcgccggttttcgcctgcgacgtagctgcaaacccttctctcgctgcctatggattctgc
aacaccgttttgaagatcgaataccgagtcgctgatctggtcgcgaggcttacgttgcaa
gaaaagatcgggtttttagtgagtaaagctaacggcgtgactcggcttgggattccgacg
tatgaatggtggtcggaagcactccacggcgtttcttacatcggacccggcacgcatttt
tccagccaagttcccggagctacgagtttcccgcaggttatactcaccgccgcttctttc
aacgtatctctgtttcaagccattggcaaggttgtctctacggaagcgagggcaatgtac
aacgtgggattagccggactaacgtattggtcaccgaacgtgaacatattccgagatcca
agatggggaagaggacaagagactccaggagaagatccattgctcgctagcaagtatgct
tcagggtacgttaaggggcttcaagagactgacggtggcgattctaaccgtctcaaagtc
gctgcctgctgcaaacactacaccgcttacgatgtcgataattggaaaggagtagaacgt
tacagtttcaacgccgtggtgactcaacaagatatggatgatacgtatcaaccaccattt
aagagttgtgtggttgatggaaatgtggcaagtgtaatgtgttcttacaatcaagttaac
ggaaaaccgacatgcgctgatccggatctgctctctggtgttatccgcggtgaatggaaa
ttgaatgggtacattgtttcagattgtgattcagtagatgtgttgtataagaaccaacac
tataccaagacaccagccgaagctgcagccatatctatattggcaggtttggatttgaac
tgtggttcattcttgggtcaacatacagaggaagcggttaagtcgggtttggtaaacgag
gcagctatcgataaagcgatttcaaacaactttttgacccttatgcgtttaggattcttc
gatggaaatccgaagaaccagatctatggtgggttgggtcctacggacgtttgcacgtct
gcgaatcaagaactagcggcagacgcggcaagacaaggcattgttctactcaagaatact
ggattcttaccgctatctcctaaatcgatcaaaacgctagcagtgattggaccgaacgca
aatgtcaccaagacaatgatcgggaactacgaaggcacgccgtgcaaatacacaacacca
ctacaaggattagccggggcggtatcaacaacatatctaccaggctgctccaatgttgct
tgtgcggtagcggatgtagcaggtgccacaaaactagccgcaacagcagatgtgacagtg
ctgttgatcggtgccgatcaatcaatagaggcagagagccgcgaccgagtggacctgaat
cttcccggacagcaacaagagctagtgatccaagtggctaaagcagcaaaaggaccggtc
ttgctcgtcatcatgtccggtggaggtttcgacattacattcgctaagaatgacccaaag
atcgccggaattttgtgggttgggtatcccggagaagccggtggtatcgccattgctgat
atcatctttggccgttataatccaagtggaagattaccgatgacttggtatccacagtcg
tatgtagagaaagttccgatgacaattatgaacatgagacccgataaatcaaaagggtat
ccgggtcggacttaccgattctacaccggagaaacagtttacgccttcggagatggactc
agctacaccaaattcagtcacagcttagtcaaagctccaagtctcgtttctctcagtctt
gaagagaatcacgtttgccgatcatcggaatgtcaatcgctggacgcaatcggaccgcac
tgcgaaaacgctgtctccggcggaggatcggcgtttgaggttcagatcaaggtacgtaac
ggaggagatagagaagggattcacacggtgtttctattcacgacgccgccggcgattcac
ggatcgccgaggaagcatttgttaggatttgagaagattcgattggggaagatggaagaa
gcggtggttaggtttaaggtagaggtgtgcaaagatctgagtgttgttgatgagattggg
aagaggaagattggtttgggaaagcatcttcttcatgtcggcgatttgaaacattcttta
agcattaggatctga
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