Arabidopsis lyrata (lyrate rockcress): 9302728
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Entry
9302728 CDS
T01578
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9302728
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
9302728
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
YkyA
DUF489
Exonuc_VII_L
V_ATPase_I
SKA1
Motif
Other DBs
NCBI-GeneID:
9302728
NCBI-ProteinID:
XP_002864945
UniProt:
D7MT90
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MSSPFSEEILIDKLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTEIAQKVHL
LYLANDILQNSKRQGNEFVQEFWKVLPGALKDLVSLGDDYGKGVVSRLVNIWEERRVFGS
RSKSLKDVMLSEEAPPPLDVSKKRLRGSKSAKRDSKSAKMKLSNGGVTEKIVSAFNLVRA
ENTNEETEMNKCKSAVRSIRKMEKDVEDACSTAKDPRRKSLAKELEEEENILRQSVEKLK
SVEESRTSLVNHLREALREQESALENLQSQIQVAQEQTEEAQNMQKRLNNETPVNNNNGT
SGQSAKITPASIAAMAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNSSDTNAFVVP
PNPQQYHIIPNPAASQQFLPYGFGNIPLMPPGALPPPPGVLPPHMMSNNNQPNAAQQQSQ
QQGQSFQPPGMMYFGPPHHS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccgttcagtgaagagatactgattgataagctcgccaagctcaacagcact
cagcaatccatccaaactctgtcacagtggtgtatagtccatcgtagtgaagctgagttg
gttgttacgacatgggagaaacaatttcacagtacagagattgctcagaaagtgcatctc
ttgtaccttgctaacgacattcttcagaacagcaagcgtcagggtaatgagtttgtgcaa
gagttctggaaagttctccctggtgctctcaaagatcttgtttccttgggagatgactat
ggaaaaggcgttgtttcacgactggttaatatatgggaagagagaagagtctttgggtcc
cgttcaaagagtcttaaagatgtaatgctctcagaagaagctcctccaccacttgatgtc
agtaaaaagcgattacggggatctaaatctgcgaaacgagattcaaaatctgccaagatg
aaattatcaaatggaggtgtgaccgagaagatagtatctgcattcaatttggttcgtgca
gagaacacaaatgaagagacagagatgaacaaatgcaagtctgccgttagaagtattaga
aagatggagaaagatgttgaagatgcctgctccactgcaaaagacccgaggagaaaatca
ttggcaaaagagctggaagaagaagaaaacattctgagacaatctgttgagaaacttaaa
tctgttgaagaaagtaggacatctctcgtaaatcatcttagggaagcgctacgcgaacag
gaatctgcattggagaatcttcaatctcagatacaggtagcacaagaacaaactgaagaa
gcccaaaacatgcagaaacggctcaataacgaaacaccggttaacaataacaacggaaca
tctggtcaatcagcgaaaatcactccggcctcaatcgctgccatggcggaaatgctaact
tcatcaacaaattcatcaatgattatgcattctgtcctgtcttcatttgcagctgaagct
acacagacttctggtctaaccaaatcaaacagttcagacacaaatgcatttgttgttcct
ccaaatcctcagcagtatcacataatcccaaatccagcagcatcgcaacagtttctacct
tatgggtttggtaacattccattaatgcctcctggagcactgccgccaccgcctggagtg
ttaccgccgcatatgatgagtaataataatcaaccaaacgcagctcagcaacaatcgcaa
caacaaggtcagagttttcagccaccgggtatgatgtattttggacctccacaccattct
taa
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