Arabidopsis lyrata (lyrate rockcress): 9302885 Help Entry 9302885           CDS       T01578                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     9302885  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:aly04121]     9302885 Enzymes [BR:aly01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      9302885 Ubiquitin system [BR:aly04121]  Ubiquitin ligases (E3)   HECT type E3    9302885 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HECT ARM_ARMC5 HEAT_EZ PDS5 Motif Other DBs NCBI-GeneID:  9302885 NCBI-ProteinID:  XP_002868849 UniProt:  D7MFL6 LinkDB All DBs Position Unknown AA seq 1884 aa AA seqDB search METRSRKRAEATSAAPSSSPSSPPSASAGPTTRSKRARLSSSSSLAPSSTTRSRSSRSAA ATAPAPMDTSTDSSSGFRRGGRGNRGNTDNTNSDKGKEKEHDVRIRERERERDRAREQLN MDAAAAAARSADEDDDNDSEDGNGGFMHPNMSSASSALQGLLRKLGAGLDDLLPSSGIGS ASSSHLNGRMKKILSGLRSEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGL LNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQAL KKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDYVMEAVPL LTNLLQYHDAKVLEYASICLTRIAEAFAPYPEKLDELCNHGLVTQAASLISTSNSGGGQA SLSVSTYTGLIRLLSTCASGSPLGFRTLLLLGISSILKDILLGSGVSANTSVSPALSRPA DQIFEIVNLANELLPPLPEGVISLPTSTNAFVKGSCQKKSCPSTSGKQEDALKISPREKL LGDQPELLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIGKLMYFSSSEMIQSLIGDTNI SSFLAGVLAWKDPQVLVPALQVAEILMEKLPETFSKVFVREGVVHAVDQLVLVGKSSHAS PTDKDNDCVPGSARSRRYRRRSSNANSDGNQSEEPKNSASLNIGANHNSLDTPTASFMLK ETVSSCAKAFKDKYFPSDGGDLDVGVTDDLLHLKNLCTKLTAGIDDHKVKGKGKSKASGP CLGDFSASKEEYLIGVISEILGELSKGDGVSTFEFIGSGVVAAFLNYFSCGYFSKEKISE LILPKLRQEGLRRFKAFLEVALPFDGNEGKVPPMTVLIQKLQNALSSLERFPVVLSHPSR SLSGSARLSSGLSALAHPLKLRLCRAPGEKTLRDYSSNIVLIDPLASIAAVEEFLWPRVQ RSESALKPAAPAGNTEPGTLPSGVGVSSPSSSTPASTTRRHSSRSRSAINIGDTSKKDPV PEKGTSSSKGKGKGVMKPAQADKGPQTRSSAQKRAVLDKDTQMKPASGDSSSEDEELDIS PVDIDDALVIEEDDISDDEDDDNEDVLDDSLPMCTPDKVHDVKLADSVDDDGLATSGRQM NPASGGTSGAAAARGSDSTDTGIGNSYGSRGALSFAAAAMAGLGAASGRGIRGSRDLHGR TLNRSSDEPSKLIFTAGGKQLSRHLTIYQAVQRQLMLDEDDDDRFGGSDLISSDGSRFND IYTIMYQRPDSQVNRLSVGGASSTTPSKSTKSATTTNSSVESQSHRASLLDSILQGELPC DLEKSNSTYNVLALLRVLEGLNQLCPRLRAQTLSDRFAEGKITSLDDLSTTAAKIPHEEF VNSKLTPKLARQIQDALALCSGSLPSWCYQLTRACPFLFPFQTRRQYFYSTAFGLSRALN RLQQQQGADGSGSTNEREMRIGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFG EVGTGLGPTLEFYTLLSHDLQKVSLGMWRSSSGDKVSMQIDRDEIEDGKSSAANIDIVLA PLGLFPRPWPSTADISEGGQFHKVIEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQ ELDLHDIVLFDAELGKTLQELRVLVARKHYLEAVGGDNSSTVSDLCLRGSRIEDLCLDFT LPGYPEYILRSGDEIVDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIF TPSELDYLLCGRRELWEVETLAEHIKFDHGYTAKSPAIINLLEIMGELTADQQRAFCQFV TGAPRLPPGGLAVLNPKLTIVRKHSSTSSAATNGAGASETADDDLPSVMTCANYLKLPPY STKEIMYKKLLYAINEGQGSFDLS NT seq 5655 nt NT seq  +upstreamnt  +downstreamnt atggaaactcggagccgcaagcgggcggaggcgacctcagctgccccatcttcttctcct tcttcacctccctctgcctctgctggtcccaccacccgcagcaaacgcgctcgtctttct tcttcttcctcacttgccccttcctccaccacccgctctcgttcttctcgctctgccgcc gccactgctccagctcccatggacacctccaccgactcttcttctggatttcgccgaggc ggtcgtggtaacaggggaaacaccgataacaccaactctgacaagggtaaggagaaggaa catgacgttaggattagggagagagaaagagaaagagaccgagccagagaacaactcaat atggatgccgctgctgccgctgctaggagcgctgacgaggatgacgacaatgacagtgag gatggcaacggcggattcatgcatcctaacatgagctctgccagcagtgctttacaaggc ttgctcaggaagcttggagctggattggatgacttgcttccttcttccggtatcggctct gcttcatcttcccacttgaatggaaggatgaagaagattctctctggcttgcgctctgaa ggagaagagggaaagcaggtcgaggctttaacccagctctgtgagatgctatccattgga accgaagactcgctaagcaccttctctgttgattccttcgtgccagttcttgtgggtcta cttaaccatgaaagcaatcccgacattatgcttcttgcagccagggctcttacccatcta tgtgatgtcttgccgtcttcttgtgctgctgttgtacattacggggcagtttcgtgctta gtagctagattgctaaccattgaatacatggacttggcggagcagtctctgcaagctctc aaaaagatatctcaggagcacccaactgcctgtttgcgagctggcgctcttatggctgtg ctctcgtatctggatttcttctccactggtgttcagcgcgtagcactatctactgctgca aacatgtgtaagaaactgccttcggatgcatctgattatgttatggaagctgtaccattg ctgacaaacctacttcagtatcatgatgcaaaggttttggaatatgcttctatatgtctg actcggattgctgaagcatttgcaccgtatcctgagaaattagatgaattatgtaaccat ggcttggtgacgcaagctgcgtctcttatttccacgagcaattcaggaggtgggcaagca tctcttagtgtgtcaacatacacggggttaatccgattactttctacctgtgcgagtggg tcacctcttggattcaggacattacttcttcttggtattagtagcattcttaaggatatt ctgttgggttctggggtctctgctaatacgtctgtatccccagcactgagccggcctgca gatcagatttttgagatagtcaacctagcgaatgagctactccctccattgccagaagga gttatctctcttcctactagcacaaacgcttttgtgaaaggttcatgccaaaagaaatct tgtccaagtacttcaggaaaacaagaagatgctctaaaaatttcaccaagagaaaaatta cttggtgatcaacctgaacttctgcagcaatttggattggatcttcttccagttttagtg cagatctatggttctagtgtcaatggtactattcgccataaatgtctctcagtcatcgga aagttgatgtatttcagcagttcagagatgattcaatctctaattggtgacacaaatatt tcgagcttcttggctggtgtcttggcatggaaagacccacaggtcttggttcctgctcta caagttgcagagatattgatggaaaagcttcctgaaacattctcgaaagtgtttgtgagg gaaggggtggtccatgctgtagatcaacttgtcttggttggtaaatcttctcacgcctca cctactgataaggacaatgactgtgtgcccggatctgcacgatctaggcgttatagacgg cgaagtagtaatgccaattccgatggaaaccagtcggaagagcctaagaattctgcgtcc cttaacataggtgcaaaccataattccctggatactcctacagctagcttcatgctaaag gaaacagttagttcctgtgccaaagcattcaaagacaagtacttcccgtctgatggtggg gatcttgatgttggagttacagatgatctcttacatctgaagaatctttgcacaaagcta actgctggtatagatgatcataaagtgaaagggaagggaaaatctaaagcctctgggcca tgccttggcgatttctctgctagcaaggaagagtacttgattggtgtcatttctgagata cttggcgagctaagtaaaggggatggtgtctcaacttttgagtttattggcagtggtgtg gttgcagcatttcttaactatttttcttgtggatacttttccaaagagaagatctccgaa cttatattgcccaaacttcgccaggagggactcagaaggttcaaagcttttctagaagtc gctcttccttttgatggtaatgagggaaaggtccctcctatgacagttctgattcagaaa cttcaaaatgctttatcgtcactggaacgctttccagttgtccttagccatccctcaagg tcactaagtggaagtgctcggctctcctctggattgagtgctttggcacatcctttaaag ttgcgattatgccgtgcacctggagagaaaacactacgtgattactcctccaatattgta cttatagatccattggcaagcatagcagcggtggaggaatttctgtggccccgagttcaa cgcagtgaatctgctctgaagccggcagcgcctgctggaaatacagagccaggcacgtta cctagcggtgttggtgtttcatcaccttcttcgtcaactccagcttccaccactcggcgt cattcttctagatctcgatcggcaattaacataggtgatacctcaaagaaagatcctgtg cctgagaaaggtaccagctcatcgaaaggaaaaggtaaaggcgttatgaaaccggctcag gcggataaggggcctcaaacaaggagcagtgctcaaaagagagctgtccttgacaaagat actcaaatgaaaccagctagcggagactccagttctgaggatgaggaattggatatatcc ccagtcgacattgatgatgccttggtgattgaagaggatgacatttctgatgatgaagat gatgataatgaagatgttttggatgacagtcttcccatgtgcacgcctgataaagtgcat gatgtgaaattggcggactcagtggatgatgatggtctagcaaccagtggccgacaaatg aatccagcttctggaggcactagtggagcagcagcagcacggggatctgattctactgat actggcattgggaattcttatggttctaggggtgcactctcctttgctgctgcagcgatg gctgggcttggagctgccagtggtagaggtatcaggggaagtagggacttgcatggacgt accctaaatcgaagttcagatgagccctctaagttgatatttactgccggaggaaagcaa cttagtaggcatttgacgatttatcaggctgtacagcgacaacttatgctagatgaagat gatgatgacaggtttggtggcagtgatctaatctcaagtgatggaagcagattcaatgat atttacaccatcatgtaccagaggccagacagccaagtgaataggttgtctgttggtgga gcaagttctactacaccgtcaaaatccacgaaatctgctactactaccaattccagtgta gaatctcaatcacatagggcatctcttttggatagtatcttacaaggggagcttccatgc gaccttgagaagtcgaattctacatataatgttctggcactgttacgtgtattagagggt ttaaatcagctttgccctcgtttaagagcccaaactctttccgatcgttttgcagagggt aaaattacaagtctagatgatctgagtacaactgctgctaaaattcctcatgaagaattc gtcaatagcaaacttacacccaaattagctcgacaaatccaggatgcgcttgctttgtgc agtggaagtcttccctcttggtgctaccaattgactagagcatgcccatttctgttcccg tttcaaacccggagacagtatttctactcaactgcttttgggttgtctcgtgcattgaat cgtttgcagcagcagcaaggtgctgacggcagtgggtctacaaatgaacgagagatgaga atagggagattgcagcgccagaaagtccgtgtatcccgaaataggatactagattctgct gcgaaagttatggagatgtattctagccagaaagctgttcttgaagtagaatattttggt gaagttggtactggtctaggccctacccttgagttttacacacttttaagccatgatctg caaaaggtttccctagggatgtggagatcgagttctggtgacaaggtatctatgcaaatt gatagagatgagattgaagatggaaaatcatctgcagctaacatagatatagttctggca ccacttgggttgtttcctcgaccttggccctcaacagctgacatatctgaaggtggtcag tttcataaagtcattgaatatttccgccttttaggccgtgtgatggccaaagcacttcaa gatggacggctattggatgtcccattgagtactgcgttttataaacttattcttggtcaa gagcttgatttgcatgatattgtattatttgacgctgaacttggcaagaccttgcaagag ctacgtgttcttgttgcccgcaagcactatctggaggcagttggtggtgacaatagcagc acggtttctgatttatgtttacgtggatcccgaatagaagatctctgcttggacttcacg ctacctggctatcctgagtacattctgagatcaggagatgaaattgttgatattactaat cttgaggagtatatatcccttgtcgttgatgctactgtgaagagaggagtcactaggcag atcgaagccttcagatctggattcaatcaggtgtttgacataacatctctacaaatattc accccttctgagctggactacttgctgtgtggtcgtagagagttgtgggaggtggagact cttgctgaacatatcaaatttgatcacgggtacactgccaaaagtccggcaatcattaac ttactggagatcatgggagaacttacagcagatcagcagagggctttctgccaatttgta actggagctcctaggcttcctcctggtggcttagctgttctgaacccaaagctcacgatt gtgagaaagcactcatcgacctcaagtgcagcaaccaacggagcaggggcttcggagaca gcagatgatgatttgcccagtgtcatgacttgcgcaaactaccttaaactccctccttat tctacaaaggaaataatgtacaagaaactgctctacgccatcaacgaagggcaaggatcg tttgacctctcataa

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