Arabidopsis lyrata (lyrate rockcress): 9302897
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Entry
9302897 CDS
T01578
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9302897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9302897
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
9302897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
DUF5088
Motif
Other DBs
NCBI-GeneID:
9302897
NCBI-ProteinID:
XP_020872719
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MVHFLALNSIYLPVENMFYDGYAYHRTTFEQTYRCYPSSFIDKPQIESGGKIIMPPSALD
RLASLHIDYPMLFELRNASTDRVSHCGVLEFIAEEGVIYMPYWMMQNLLLQEGNIVRVRN
VTLPKGTYVKLQPHTTDFLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEA
KPSNCISIIETDCEVDFAPPLDYKDPERPVVPASAKGQAKANEVAVAEAEPKFNPFTGSG
RRLDGRPLSYEPQPVAANSNGQSHSVASSSGSEKATQQTQGKLVFGSHVNRATKETTKVG
AGKDRKQEEEAEKKDKFNAFSGKKYSLRG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttcactttttggcgttaaactcaatttatctaccagttgaaaatatgttttacgat
ggatacgcatatcatagaactacctttgagcagacttaccgctgttatccctcatccttt
attgataagcctcagattgaaagtggtggcaagattataatgccaccatcagcccttgat
cgtctagcctctttgcatatcgattatccaatgctctttgagcttcgtaatgcttcaact
gatcgtgtttctcactgcggagtccttgagttcatcgcagaagaaggcgtgatttacatg
ccctactggatgatgcagaacttgctgttgcaagaaggaaacattgtgagagttagaaat
gtcactcttccaaagggaacctacgtgaaactacaaccccacacaacagactttctcgat
atagctaacccgaaagccatcttggagaccgcattgaggaactattcatgtctaacggtt
ggagatagcattatggtcccatacaacaataagaaatacttcatagatatagtggaggca
aagccttctaattgtatcagcatcattgaaactgattgtgaggttgatttcgctcctccc
cttgattacaaggatcccgaacgacctgtagtacctgcttcagctaaaggtcaagcaaaa
gctaatgaggttgctgtggctgaagcagaaccaaagtttaaccctttcacgggttcggga
agacgtttggatgggcgacctttatcctatgaaccgcaacctgttgctgctaacagtaac
ggccaatcacactctgtagcaagtagtagtgggtcagagaaggctacacaacaaactcaa
gggaaacttgtgtttggttcacatgtaaaccgggctactaaagagacaacaaaggttgga
gctgggaaagatagaaagcaagaggaagaggctgagaagaaagacaagttcaacgctttt
agtggtaagaaatattcattgaggggttga
DBGET
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