Arabidopsis lyrata (lyrate rockcress): 9303049
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Entry
9303049 CDS
T01578
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9303049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9303049
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9303049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP58_M
Nucleoporin_FG2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
9303049
NCBI-ProteinID:
XP_020872237
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSLLTPQQQQTPQSLFQTQQQLFQPQQTNSIFSQSQPQQTNSIFSQSQPQQQQQPSLFQP
QQFQQQQQQQQNQQQQQQVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEH
RSESQRLDQCSRLYDSSVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLR
NAEIAVRSFMMLQPRFPHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDF
YRGIPKKPTAFLLQTVGRFEKYLNECRQWVEELEQLLALDSDKYNRHASLLESLPKVMSN
VHDFFVHVAAKVESIHQYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHP
TLHLPASTTSTQPSTQVTGLIASSATPGASNPPQTSVPTSNPSSGAGFSFLNTPASGPSS
SIFATPSSTAPTSSLFGPSPTATQTPLFGSSPASTFGSAQSLFGQTTPSLAMPSPFGGAT
PGSGASFGSMTKSSRPKSRTTRR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttgaccccacagcaacaacagacgcctcagtcgctttttcaaactcagcaa
cagttgtttcagccgcagcaaaccaattccatcttctcccaatcgcaaccgcagcaaacc
aattccatcttctcgcaatcgcaaccgcagcagcaacagcaaccgtcgttgtttcagccg
caacagttccagcagcagcagcagcaacaacaaaatcagcaacagcagcagcaagtacaa
caacagttgtatttgttcaccaacgataaagctccggcgaattacagtaccaaatgggcc
gatcttcatcccgattctcagaaactcttgcttcagattgaagagaagatattggagcat
agaagtgaaagtcagagattagatcagtgtagtcgactttatgattcttctgtatccagt
gaagggtttgagtttgatgctagccgcattgttcaggagcttggtgggattaatactgcc
atggaccgacaaaaagctgttctccatgagcttatgattgttgccaaagatatgctgcgt
aatgcggagattgcagttcggtcttttatgatgctgcagccaagatttcctcattggaaa
caaggaggaggagttgttagtgttggttctcaaccatcccaggggcagggaacaaatcca
gctccagcttcctctggtcaacaacaagctgttactacgacggttcaagtttctgatttt
taccgtgggattccaaagaaaccaacagcttttctactgcaaacagttggaaggtttgag
aagtatctaaatgagtgccgccaatgggttgaagagctggagcaattactcgccttggat
tctgacaagtataatcgacatgcttcccttttagaatctcttccaaaagtcatgtctaat
gttcatgacttctttgttcatgtggctgctaaggtagagagtattcaccaatatattgaa
tcaatgagaacatcgtatcttgctgaccagcgccgaagaggagaatgccatgatccgttt
cttgaggctgatcgaagggagacagcaaagcaggaagcagctgctaaaagagtccatcca
actctgcatcttcctgcttctactacaagtacacaaccctcaacacaggttactgggttg
attgccagctcagccactcccggggcttcaaatcctccacagacatctgttccaacatca
aacccttcttcaggagctggtttttcgtttctcaacacacctgcttctggaccttcgtct
tctatctttgctacaccatcttctactgctcctacctcgtctttgtttggaccatcccct
actgccacacagacgccactttttgggtcttccccggcttctacatttggttccgctcaa
tctttgtttggccagacaactccatcacttgctatgccttcaccatttggaggtgctaca
ccaggatcaggagccagctttggttctatgacaaaatcttcaaggccaaaatctcgaact
acacgccgttag
DBGET
integrated database retrieval system
