Arabidopsis lyrata (lyrate rockcress): 9303113
Help
Entry
9303113 CDS
T01578
Name
(RefSeq) cold shock protein 1
KO
K09250
cellular nucleic acid-binding protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9303113
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
9303113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
CSD
zf-CCHC_5
zf-CCHC_4
OB_RNB
CSDE1
Motif
Other DBs
NCBI-GeneID:
9303113
NCBI-ProteinID:
XP_020874931
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MASEDQSAVRSTGKVNWFNDSKGYGFITPDDRSEELFVHQSSIVSEGYRSLAEGDSVEFA
ITQGSDGKTKAVEVTALGGGALKKENNSRGNGARRGGGSGCYNCGELGHIAKECGGGSGG
GERGSRREGCYNCGDAGHFARDCTQKSVGNGDQRGAAGAGKDGCYNCGDIGHFARDCGNQ
KVTAGSVRSGGGSGSCYTCGGVGHIARECATKRQPSRGCYQCGGSGHLARDCDQRASGGN
GGGNKCYSCGKEGHFARECSVA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatcaatcggcggtgagatctaccgggaaggttaactggtttaacgat
tccaaaggctatggtttcattactcctgacgaccgcagcgaagagcttttcgttcatcaa
tcctcaattgtctccgaaggttaccggagtttagctgaaggcgattcggttgagttcgct
attactcagggaagcgacggtaagactaaagccgtcgaggttactgctctcggtggtggt
gctcttaagaaggagaataactctcgcggtaacggtgctaggcgcggcggtggaagcggt
tgctacaattgcggtgagttaggtcatattgcaaaggaatgtggtggcggcagcggaggt
ggtgaacgtggatctagaagagaaggctgttacaattgtggtgatgctggtcacttcgct
agggattgtactcagaaatcagttggaaacggagaccaacgtggagcagccggagctgga
aaagatggttgttacaattgtggtgacattggtcacttcgctagggattgtggtaatcag
aaagtgactgctggaagcgtcagaagcggtggtggtagtggatcttgttatacatgtggt
ggagttggtcacattgcaagagagtgtgcgactaagagacagccttctcgtggttgttac
cagtgtggtggttctggtcacttggctcgtgattgtgaccagagagcaagcggtggaaac
ggtggtggtaataagtgctacagttgcggtaaggaaggtcactttgcaagggaatgctct
gtagcttaa
DBGET
integrated database retrieval system