Arabidopsis lyrata (lyrate rockcress): 9303244
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Entry
9303244 CDS
T01578
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9303244
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
9303244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
Motif
Other DBs
NCBI-GeneID:
9303244
NCBI-ProteinID:
XP_002867172
UniProt:
D7M8Q0
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MEDSPQGLVKKRRRVRDQDDGSDQIELDFQETRPKPKRSRTHPPPQQNLIEVVKGNGDLI
SKAVKIWVERYEHSPRLATTELLSMLFQACGAKHSIKEDLLDETDVHDVVIAFVNSDEAG
EVEDYQSWRNKELNNFKENLVSFWNYLIIECQHGPLFDKLLFNKCMDYIIALSCTRPRFY
RQTATLMGLQLVTSFISVANTLSSQRQTTQRQLNAQSKKRADGPRVDSLNKRLSVTHEQI
TTLEGMMRKIFTGLFVHRYRDIDNDIRMSCIQSLGIWILSYPSLFLQDLYLKYLGWTLND
KNAGVRKASLLALRRLYETDENVPTLGLFTQRFSNRMIKMGVDVDMSAAVCAIGLVKQLL
RQQLIPDDDLGPLYDLLIDQPQEIRRAIGELVYDHLITQKFNTSPSSLTGPGDFSSEIHI
FRMLQILREFSTDTIISVYVIDGVWEYMKAMKDWKCIISMLLDQNPQTGSTTDEDSTNLI
RLLIVSIRKAVGEKTIPSTDNRKQYHTKAQREMFENNRKDLTVAMMKNYPQLLRKFMADK
AKVSSLVEIIMFMKLELYSLKRQEQSFKAAVRLIIDAFFKHGEKEALRSCVKAITFCASE
SKGELQDFSRGKLKDLEDELLDKLTCAIREVKDGNDEYSLLVNLKRLHELQLLKPVLVES
MFHGIALTLRNFRNLDEEVICFLLMNMYMYLAWSLHSIINCEAISEASLSSLISKRDTLF
EELSYFLNGIEESKKYGNQLSLRICAILAETWCLFRKSNYDSSKLERLGYCPDSVFLEKF
WILCAETFSTSDETDEEDENTEYVEETNRDVAVIAACKLVASDVVPKDYLGPEIISHLGM
HGPGVTGIIKNLITCLSKKEDDISNIYLESLKRAYHRYSSELSSGREESRVDKCLQVCRE
LAGGLSEMYIGAACNKYRLEIFSVVKEGVEFAFRDAPKQLLFLEVAILPFATRLSVPDII
DIKKDVQGRIVHVNTDEDPSGWRPCFTFLVCLILREIER
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagtcctcaaggccttgtgaagaaaaggagaagagttcgggatcaggacgac
ggcagcgaccagatagagctcgatttccaggaaacccgtcccaagcccaagcgtagtcgc
acccatcctcctcctcaacagaatctcattgaggttgtcaaaggcaacggggatcttatt
tctaaagccgtcaagatttgggttgaaagatatgaacactctcccagacttgccaccact
gagctcttgtcaatgctctttcaggcttgcggtgctaaacactccatcaaggaagatctg
cttgatgagactgatgtccatgatgttgtcattgcctttgttaatagtgatgaagccggg
gaagttgaagattatcagagttggagaaacaaggaactcaacaacttcaaagaaaatctt
gtttcgttctggaattatctgattatcgagtgccaacacgggccattgtttgataaactc
ttgttcaacaagtgcatggactacataatcgcactgtcatgcactcgacctagattttac
cgtcaaactgccacgctaatgggcctccaactagttacatctttcatttctgttgcaaac
acactcagttcacagcgacaaaccacccaaagacaattgaatgctcaaagcaagaagaga
gctgacgggcctcgtgtggactccctcaacaaaaggttgtctgttactcatgaacagata
actacactggagggcatgatgcgaaaaattttcactgggttgtttgtacaccgatatcga
gatattgataacgatattcggatgtcatgcattcagtctctcggcatttggattttgtct
tatccttctcttttcttacaagatctgtacttaaaatatcttggatggacgcttaatgac
aaaaatgctggagtgaggaaagcttctctattggcattgcgaagactttatgaaacggat
gaaaacgtccccacgcttggtctattcactcagagattttccaatcgaatgatcaagatg
ggtgttgatgttgatatgtctgcagctgtatgtgctatagggcttgtaaagcaactgcta
agacaacagctgatacctgatgatgacctaggccctttgtacgatttgcttattgatcaa
cctcaagaaatcagacgtgcgataggagagttagtgtatgaccacttgatcacacagaag
tttaacacttctccgtccagtcttacaggtcctggtgatttttcctctgagatccatatc
ttcagaatgttacaaatattacgggagttctccacagatacgattataagtgtttatgta
attgatggtgtttgggagtacatgaaggccatgaaggactggaagtgtatcatctctatg
cttttggatcagaatcctcaaactgggtctactactgacgaggactcgacaaacttgatc
agacttctgattgtgtcaatcagaaaggctgtcggggagaagacaattccttcaacggat
aatcgaaagcagtatcacactaaagctcagcgagaaatgtttgaaaacaacaggaaagac
ttaacggtggcaatgatgaagaattatccacagcttctacgtaaattcatggctgacaaa
gcaaaagtgtcgtctttggttgagattattatgtttatgaaacttgagctctattctctt
aaaagacaggagcagagttttaaggctgccgtccgactcataattgatgcttttttcaaa
cacggggaaaaagaagcactaagatcttgcgtcaaggctataacattttgtgcgtcagaa
agtaaaggggagcttcaagatttttcccgtgggaagcttaaagatcttgaagatgagctt
ttagataagctcacttgtgcaattagagaagtcaaggatggaaatgatgaatactccctc
cttgtaaatctgaaaaggttgcatgagcttcaattgttaaagcctgtgcttgttgagagc
atgttccatgggattgctttgacgctccgcaatttcagaaatttggacgaagaggttatc
tgtttcctgcttatgaatatgtacatgtatttggcgtggtctctgcactccatcataaat
tgtgaagctatctccgaagcttccttatcttcccttatatcaaagcgtgatactctgttt
gaggagctttcgtacttcctgaatggaattgaggaatcgaagaaatatggtaatcagcta
tcgctcaggatctgtgctatactcgccgaaacatggtgtttgtttagaaagtcaaattat
gactcgagtaaacttgaaagattaggatactgtcccgacagtgtctttcttgagaaattt
tggatactctgtgcagaaacttttagcacttcagatgagaccgatgaggaggatgaaaat
acggaatacgttgaagagacaaacagagatgttgcagtcattgctgcctgcaagttggtt
gctagtgatgtagtgccaaaggattatctaggaccagagataatatcacatcttggtatg
catggacctggtgtaacaggcatcataaagaatcttattacatgcttaagcaaaaaagaa
gatgacatctctaatatctatctggaatccttgaaaagggcctatcaccggtattcaagt
gaactttctagtggccgtgaagaatccagggtagataaatgtcttcaagtgtgccgggag
cttgcaggtgggctctcagaaatgtatatcggggctgcttgcaacaagtacagattggag
atttttagtgtggtcaaggaaggtgttgagtttgcttttagggacgccccaaagcaactg
ttgtttctggaagttgctatccttccatttgcaaccagactctcagtgcctgacatcatt
gacattaagaaggacgttcaagggcgtatagtgcatgttaatacagacgaagatcccagc
ggatggcgtccttgcttcaccttcttggtttgcctcattcttcgtgaaatagagcgatga
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