Arabidopsis lyrata (lyrate rockcress): 9303354
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Entry
9303354 CDS
T01578
Name
(RefSeq) SEC1 family transport protein SLY1
KO
K19998
sec1 family domain-containing protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9303354
Membrane trafficking [BR:
aly04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
9303354
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
9303354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2096_N
Motif
Other DBs
NCBI-GeneID:
9303354
NCBI-ProteinID:
XP_002869314
UniProt:
D7MAW0
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MALNLRNKQMECIIRMLNLNQPLNPNEECYKALIYDDFCEKIIAPLMQVKDLRKQGVTLP
LSINKKREAVRDAAAVYFLQPTESNIQRIIADASRSLYHSYHLNFSYRIPRPLLETLASA
TLNSGSTERLATVHDQYLEFVTLEDNMFSLAQESIYLQLNDPSAGDREIEEIIEKVANGL
FCVLATLGVVPVIRCPRGGPAEMVASSLDQKLRDHLLSKINLFTEGGGGFISSFQRPLLC
IFDRNFELSVGIQHDFRYRPLVHDVLGLKLNSLKLPGQKDDKKTFVDSSDPFWSANGSLE
FPEVAVEIETQLNKYKKDVEEVNRRTGGGNGSAEFDGADLIGNTKHLMNAVNSLPELTER
KKVIDKHTNIATALLGEIKERSLDAYTKKENEMMVRGSIDRSELLSVLKGKGTKMDKLRF
AIMYLISLETINQAEVEAVEAALREAEADTRAFQYVKKIKSLNVSLAASASRSNIVDWAE
KLYGQSISAVTAGVKNLLSSDQQLAVARTVEALTEGKPNPETDSYLMLDPRASKSGSSGN
SYVKGPFKEAIVFMIGAGNYIEYSSLQELSQRQEMVKNIIYGATEILTGTELVEQLAVLG
QKMGLK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatctccgcaacaaacagatggaatgtataatccggatgctgaacctgaat
caaccattgaatccaaacgaggaatgttacaaggccttgatctacgacgatttctgtgag
aagattatcgctcctctgatgcaagtgaaggatcttcgtaaacaaggagttacacttccc
ttgtccatcaacaaaaagagagaagctgttcgtgatgctgcagctgtctactttcttcaa
cccactgaatccaacatccagagaatcattgcagatgcttctagatctctttaccattcc
tatcatctgaatttctcgtatcgtatccctcgcccgctcctagaaactctcgcttctgcg
actctgaattccggttccactgagagacttgcaacggtgcatgatcagtatctcgagttt
gttactttggaagataacatgttttctttggctcaggaatctatctatcttcagttgaat
gatccatcagcaggagatagagagatcgaggagattatcgaaaaggtcgctaatgggctg
ttctgtgtattggcaacgcttggtgtggtgcctgtaatccgatgtcctcgtggtggacca
gcggagatggttgcatcttcgttggatcagaaactgagggatcatcttctgtctaagatc
aatctgtttaccgaaggtggaggcggtttcattagttcgtttcagcggcctttgttgtgt
attttcgatagaaactttgaactctcggttgggattcagcatgatttcagatacaggcct
cttgttcatgatgttttgggtctaaagctcaacagtttgaaattgcctggccaaaaagat
gataagaaaacatttgtagacagttcagacccgttctggtcagcaaatggttctttagag
tttcctgaagtcgctgtagaaatcgaaactcagttgaataagtacaaaaaagacgtggaa
gaggttaacaggagaactggaggtgggaacgggagtgcagagtttgatggggctgatctg
attgggaacaccaagcatctgatgaatgctgtcaactcacttccggagttgacagagaga
aagaaggtgattgacaagcacaccaacattgcgactgcgctgctaggagagatcaaggag
cgatctctggatgcatacactaagaaagagaatgagatgatggtgagaggcagcatagac
aggagcgagcttctatctgttttgaaagggaagggtaccaaaatggacaagttacgattt
gccatcatgtacctaatctccttggaaaccatcaaccaggctgaagttgaagccgtggaa
gcggcattgcgtgaagctgaggccgatacaagagcgtttcagtatgtgaaaaagatcaag
tcgctgaatgtgtctttggcagcctcagcaagcagaagcaacattgttgactgggctgag
aagctttatggtcagtctataagcgcggtcactgcaggggtcaagaatctcttatcaagt
gatcagcaactggcggtggcgcggacagttgaagccttaactgagggaaaaccaaaccca
gaaaccgattcatacctcatgctggatccgagagcttcaaagtcaggatctagtggtaat
agttatgtgaaggggcctttcaaagaagccatagttttcatgattggtgcaggtaactac
atcgaatatagcagtttgcaggagctctcgcagcgacaagagatggttaagaacattata
tatggagccacagagatccttactggaactgagcttgttgagcagctcgctgtgttgggt
caaaaaatgggactgaaatag
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