Arabidopsis lyrata (lyrate rockcress): 9303384
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Entry
9303384 CDS
T01578
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aly01001
]
9303384
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9303384
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
9303384
Protein kinases [BR:
aly01001
]
Serine/threonine kinases: Other
Other
9303384
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9303384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
LisH
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
LisH_PAC1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
9303384
NCBI-ProteinID:
XP_020875696
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MDGQEHAEVPNQMVEDEQSVVAAEAITELANSNNEANPEEGGQQEGEEESVEDELIAKAQ
KLMDDITSVANNPNPNFLHALSHLLESQESLFLEENGHFSNARGSHSSGKLCTLIRENDE
FFELISSTFLSENSYSTAVKAASARLLMNCSLTWMYPHVFDDAVTENFKNWVMEEAVKFP
GEDSGRKEASDSEMLKTYSTGLLALSLASRGQIVEDVLTSGLSAKLMHYLRVRVIGEPST
SRRDALHTTETKHVSLKTKEEGRSRVRKVVDTVEGDHVFETDSGREMGQTDVQSDGEFEI
DGREIFNVSGVVDCKIKPGDDNSGRDDPSRHRLNRSKSRGRGRVNEGATDTEVLLASPRS
GRPVVRDKDLSKFSDGRNGEDVTICLGKMKSGIMEIEREDDDECFQGCIIGTKNIIDLVK
RAVGAAETEARAAHAPDDAAKAAGDAAAELVKTAALEEFKSSGSEEAAVSAATRAAITVI
DAAEVSRNPTCVTSDQTTDVSEVSLPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEK
GVDVCIMLLERTSQCDDSSTVSPLLPDVMKLICALAAHRKFAAMFVDRGGIQKLLAVPRV
SETFYGLSSCLYTIGSLQGIMERVCALPSDLIHQVVKLAIELLDCSQDQARKNSALFFAA
AFVFRAILDAFDAHDSLQKLLAILKDAASVRTGANSDRSAPEVMTSSEKQMAFHTCFALR
QYFRAHLLLLVDSIRPSRSSRGGVRNVPNIRAAYKPLDISNEAVDAIFHQLQKDRKLGPT
FVRTQWPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSIPDGRKAIAH
ATLSNNRAGIAVILDAANISNSIVDPEIIQPALNVLINLVCPPPSLSNKPPLAQNHQPVP
GQATTRPSTDVAVGTQSTGNAPQTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQ
AREAVRGNDGIKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIAQILTKLEVG
KSLSELIRDSGGQSSGTDQGRWQAELAQVALELIGIVTNSGHATTLTASDAATPTLRRIE
RAAIAAATPITYDSKELLLLIHEHLQASGLGETASALLKEAQLTPLPSLASPSSIAYSST
QEMSTPLAQEQWPSGRANSGFFTSKPKVCAHDEDPNSRCNAAISAKKKHLASSTLEIPTP
VAQQQWPSGRANSGFFPSIPRINALDEDPSSRGNAAPSAKKKQLTFSPSFSLQSRKQSFS
HDAQPQSTQRINSSSNSDPAWADTSETAAELVLKNDLDADAQFKTPISFPRKRKLSELRD
PELSVPGKRINLGELGLRSPACPTTSSLRRNSTIAESSGLQTPASALDANQSGSSRLGQM
TPASQLRLPSDPQPSNPERLSLDSLVVQYLKHQHRQCLAPITTLPPVSLLHPHVCPEPKR
LLEAPLNITGRLGTRELQSFYSGVHGNRRDRQFVFSRFKSWRSFRDETALFTCIALLGGT
NHLAVGSHAGEIKIFEASSGTLLESFSGHQAPVTLVQPYVSGDTQLLLSSSSSDVQLWDA
SSITGGPRHSFDGCKAAKFSNSGLQFAALSCEASTKDVLLYDVQTCSPCDKLTDTVTSSR
SNPYSLVHFSPCDTLILWNGVLWDRRIPESVSRFDQFTDYGGGGFHPSRNEVIINSEVWD
MRNFKLLRSVPSLDQTAITFNSRGDVIYAMLRRNIEDVMSAVHTRRVKHPLFAAFRTLDA
INYSDIATIPVDRCLLDFATEPTDSFLGLITMEDQEDMFSSARMYEIGRRRPTDDDSDPD
DDDETDDEDEDDEDEEDDLDRILGLGVDDSDSGDDDLSSDDNEDSVSDFDEEGEILIDGL
DGGFMGIIEGEDEDDDNGGDGEDDDDDGEMQDFMSSGEEDDYRDNIRSS
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcaagagcatgccgaggtccctaatcagatggttgaggatgaacaatcggtt
gttgcggcggaggcaattacagagttggcgaattcaaacaacgaagctaatcctgaagaa
ggaggacaacaggaaggagaagaagagagtgtggaggacgagcttatagcgaaggcgcag
aagcttatggatgatattacttccgttgctaataaccctaatcctaatttccttcacgct
cttagtcatcttctcgaatctcaggagtctctgttcttagaggagaatggccatttctcc
aatgctcgcggtagtcatagcagtggcaagctgtgtactctcatccgagaaaatgatgag
ttttttgaattgatatcgtcaacttttctatctgagaattcttactcaaccgccgtaaag
gcagcctctgcaagattgctaatgaactgttcgcttacttggatgtatcctcatgttttc
gacgatgctgttaccgaaaactttaaaaattgggttatggaagaagcagtcaagtttcct
ggtgaagactctggcaggaaggaagcctcagattctgaaatgttaaagacttattctaca
ggacttcttgctctctctctcgccagtcgtgggcaaatagttgaagacgttttgacatca
ggactatctgctaagcttatgcattatcttcgagtacgagttattggagagccaagcaca
agccgtagagatgcccttcacacaactgagactaaacatgtgtccttaaaaacaaaagaa
gaaggtcgaagtagggtgcgtaaggttgtggatacagttgaaggtgaccatgtttttgag
acggactctggcagagagatgggacaaactgatgtacagtctgatggtgaattcgaaatc
gatggcagggaaatatttaatgtttcaggtgttgttgattgtaaaattaaacctggagat
gacaatagtggaagagatgacccttcaagacacagactgaaccgatcaaaatcgaggggg
agaggaagggttaacgaaggtgcaactgatacagaagttctcttggcatctcctagatca
ggtcgtccagttgtcagagataaggatctatcaaaattttcagatggcagaaatggagaa
gatgtgaccatatgtctggggaaaatgaagtctggtataatggagatagagagagaggat
gacgatgaatgctttcaaggttgcataataggaacgaaaaacataattgatctagtaaag
agagccgttggagctgcagaaacggaagctagagctgcccatgctcctgatgacgcagct
aaagcagctggcgacgctgcagcagagcttgttaaaactgctgctttggaggaattcaag
tcttctggcagtgaagaagctgctgtgtcggctgctactcgagcagctattacagtcata
gatgctgcagaggtttcaagaaatcctacttgtgtcacatctgatcagacaacagatgtt
agtgaagtttcacttccagatatcgaatctttggctcagttacaagaaaaatattgcatc
cagtgccttgagatactgggagaatatgtcgaggttctcgggcctgtactgcatgaaaaa
ggtgttgatgtatgcattatgctgctggaacgtacatcccagtgtgatgatagttctaca
gtgtctcctttgttacctgatgtcatgaagttaatttgcgctttggctgcgcaccggaag
tttgctgcgatgtttgttgaccggggtggcatacaaaaattacttgctgttccaagggtt
tctgagacgttttatggtctctcatcttgcttatacaccattggctctcttcagggtata
atggagcgtgtctgtgcacttccatcggatctcatacatcaagttgttaaattagctatc
gaacttctcgactgttcccaggatcaagccagaaaaaattcagctttattctttgctgct
gcttttgtctttagagccattttagatgcatttgatgctcatgatagtttgcagaaactc
cttgcaattcttaaagatgcagcctcagttagaactggtgctaattctgaccgatcagct
cctgaagtcatgacgtcctcagagaaacagatggctttccacacgtgttttgctttgcgc
cagtattttagagctcatcttcttttgcttgttgattcaatccgtcctagcagaagtagc
cgaggtggtgtgcgaaatgttcctaatataagggcagcctataagccccttgacatcagc
aatgaagctgttgatgccatcttccatcagttacagaaggataggaagttgggtccgacc
tttgtgcgaactcagtggcctgctgtcaataactttttggcctcctctggacatgttacc
atgttggaactttgtcagactccaccagtagaccgttatctgcatgatctacttcagtat
gcttttggggttcttcacatagttacatcaatacctgatggccgcaaagcaattgcgcat
gccacactcagcaacaatcgtgctggcattgctgtcattctggatgcagcaaatatttcc
aacagcatagtagaccctgagatcattcagcctgcactaaatgtcctaatcaatctggtg
tgcccaccaccatcattaagcaataagccgccccttgcacaaaatcatcaacctgttccc
ggccaagccactacccgtccctctactgatgttgctgtaggtactcagtccactggtaat
gctccgcaaactcctgttgcaccagcatcttcaggtttggttggggatcggagaattttc
ttaggagcaggaactggttctgctggccttgctgctaagttggagcaggtttatcgtcaa
gcccgtgaagctgttcgtgggaatgatggtataaaaattcttttaaaacttcttcagccc
agaatatatgtgaatccccctgctaccccagattgtctacgagcgctggcttgcagggta
cttcttggtctggctagagatgatacaattgcacaaatactgactaaacttgaggttggt
aagagtttatcagaactaattcgggattcaggtggtcagtcaagtggcacagatcagggc
agatggcaggctgaacttgctcaggtggcgctcgagctaatagggattgtgacaaattca
gggcatgcgactacactaacagccagtgatgctgctactccaacactgaggcgcattgaa
agagctgccattgcagcagcaacgcctataacttatgattctaaggagcttttgctgctt
atccatgagcacctccaggcatcaggtcttggtgaaactgcttcagcactgttaaaagag
gctcaattaactcctctaccttcattggcttccccttcttctattgcatattcctctaca
caggagatgtctacgccgctagctcaggaacaatggccctctggccgtgctaacagtgga
tttttcaccagcaaacccaaagtctgtgcacatgacgaagatcctaattctagatgtaat
gcggctatatctgccaaaaagaagcatttggcttcctcgacactggagatacccacacca
gtagcacagcaacagtggccatcaggccgtgctaacagtgggtttttccccagcataccc
agaatcaatgcacttgatgaagatcctagttcgagaggtaacgctgctccatctgcaaag
aagaagcagttgactttctcacccagttttagtttgcagtcacgaaagcaatctttctcc
catgacgctcaacctcagtctacacagagaataaatagtagttcgaattcagatcctgct
tgggcagatacatcagaaactgctgcagaattagttttgaagaacgatcttgatgccgat
gctcaatttaagaccccgatttcctttccaagaaaacggaaattgtctgagcttagagac
ccagagttgtcagttccgggtaaaagaatcaatttgggtgagttaggactacgatctcca
gcttgtccaaccacatcttccttgcgtaggaattcaaccattgcggaaagctcaggtttg
caaacaccagcttcagctttagatgccaaccaatctgggagttccagactgggccagatg
acacctgcttctcagctaaggcttccaagtgatccccagccttcaaatccagaacggtta
tcactagactcccttgtggttcagtatttgaagcaccaacacaggcagtgcctggctcca
ataacaactcttccccctgtgtctctcctacatccgcatgtctgtcctgaacctaaacgg
ttacttgaagctccactaaacatcactggccgtcttgggacccgtgagcttcaaagtttc
tacagtggagtccatggtaatcgcagggatcgtcaatttgttttcagcagattcaaatct
tggagatctttccgggatgagactgctctctttacatgcattgcacttcttggtggtact
aatcatttagcagtcggtagtcatgctggagaaatcaagatatttgaagctagcagcgga
accttgcttgagagtttctcaggtcaccaggctccggttacacttgttcagccgtatgtc
tctggggatactcagttgttactttcttcgagctccagtgatgtacagttgtgggacgcg
tcttctataactggtgggcctagacactcctttgatggatgcaaggctgcaaaattcagc
aactctgggctacaatttgcagcactttcttgtgaagcatcaacaaaagatgttcttcta
tatgatgtacagacctgcagtccttgcgataaactcactgacacagtcacatcttctcga
agtaatccctattctcttgtacacttcagcccttgtgatacactaattttgtggaatggt
gttctctgggaccgccgtatacccgagtctgtcagtcggtttgatcaatttactgattat
ggtggcggtggttttcatccttctaggaacgaggtgatcataaactcagaggtctgggac
atgaggaatttcaagcttcttcgaagtgtaccatcactggaccagacagctattacgttc
aactccaggggagatgttatatacgcaatgctgaggagaaacatcgaagacgtaatgtct
gcagttcacacacgccgtgtgaaacatcccttgtttgctgctttccgcactcttgatgcg
atcaactactcagacattgccactatacctgtggaccgatgtcttcttgactttgccaca
gaaccaacagattcgttccttggactgatcacaatggaagaccaagaagatatgttttcc
tcggccaggatgtatgagattggtagacggaggccaacagatgatgactcggatcccgat
gatgatgatgagacggacgatgaagatgaagatgatgaagacgaggaagatgacctggac
cgaattctgggactaggtgtagacgatagcgatagtggggatgatgaccttagcagcgac
gacaatgaagatagtgtgagcgattttgatgaagaaggagagattcttattgacggtctt
gacggtggctttatggggattatagaaggtgaggatgaagacgatgataatggtggtgat
ggtgaggatgatgatgatgacggtgagatgcaggatttcatgagcagtggcgaagaagat
gattatagagacaatattcgttcttcctaa
DBGET
integrated database retrieval system
