Arabidopsis lyrata (lyrate rockcress): 9303415
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Entry
9303415 CDS
T01578
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
9303415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9303415
03029 Mitochondrial biogenesis [BR:
aly03029
]
9303415
Membrane trafficking [BR:
aly04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
9303415
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
9303415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
Beta-prop_TEP1_2nd
EIF3I
VID27
Motif
Other DBs
NCBI-GeneID:
9303415
NCBI-ProteinID:
XP_002867343
UniProt:
D7MBV2
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MANQSSSLPSPIYCVSFNQDNSGFAISWKDSFKIFDSTTGRLCYERAAGAFVIVEMLYSS
DLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLEKTFVY
DLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASATKGSVLVYNVMDLQSHSEIDAH
RSPLAAIALSSNGMYIATASEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFGPSTQL
PDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSG
IRSYAVVRKIDKLEGTSSPSQFTSLRATVSVITYNGYFQEYTLSINNKNESLWTMEREFN
LFSITTG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcgtcctctcttccttctcctatctattgtgtttctttcaatcaagat
aatagtggttttgctataagctggaaagattccttcaaaatattcgattccactacaggc
agactctgctatgaacgagctgctggagcttttgttattgttgagatgttgtatagctca
gatctacttgccattgttggagctggtgaacaggcttctctatccccacggcgtctttgt
ttgttcaagaccacaacgggtttacctcttagggaattgaactttttaacttctatactc
gctgtccgtatgaacaagaaaagacttgttgttgtgctgctagagaaaacattcgtttac
gacttgaatacccttgtcatgcttgatactatcgacaccgtgccaaatcctaaaggtcta
tctgcattctctccatctcttgaaggctgctacttagctgttccagctagtgcgacgaaa
gggtcggttttggtgtataacgtcatggatttgcagtctcatagtgagatagatgcacat
cgttctccattggctgcgattgcactctcgtcaaatggaatgtacattgctacagcatct
gagcaaggaaccttgatccgagtccatcttgtttcggaagcaactaagtcatatagtttc
aggagaggaacatacccatctactatatactcactgtcttttggaccatcgacacagctt
ccggatatattaattgcaacgagttcttcaggctccattcatgccttctctttaagtttg
gccataaaccaaagaagcaaaaggtctaccagctttcttggatcagttcttccggacagc
gtgagtgatgcactggatccagctcatcatcatgtgcttcaaaacgcagtttcttctggg
attagaagttatgcagtggttaggaagatagacaaacttgaaggaacatcatctccatct
cagtttacatctcttagagcaacggtatcggtgattacttataacgggtatttccaggag
tatacgctaagtatcaataacaagaatgagtctttatggacaatggaacgtgaattcaat
ctcttctccataacaactgggtga
DBGET
integrated database retrieval system