KEGG   Arabidopsis lyrata (lyrate rockcress): 9303415
Entry
9303415           CDS       T01578                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    9303415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9303415
   03029 Mitochondrial biogenesis [BR:aly03029]
    9303415
Membrane trafficking [BR:aly04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    9303415
Mitochondrial biogenesis [BR:aly03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    9303415
SSDB
Motif
Pfam: PROPPIN WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_Vps41 WD40_MABP1-WDR62_1st BCAS3_WD40 Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz Beta-prop_IFT140_1st Beta-prop_RSE1_2nd Beta-prop_TEP1_2nd EIF3I VID27
Other DBs
NCBI-GeneID: 9303415
NCBI-ProteinID: XP_002867343
UniProt: D7MBV2
LinkDB
Position
Unknown
AA seq 367 aa
MANQSSSLPSPIYCVSFNQDNSGFAISWKDSFKIFDSTTGRLCYERAAGAFVIVEMLYSS
DLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLEKTFVY
DLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASATKGSVLVYNVMDLQSHSEIDAH
RSPLAAIALSSNGMYIATASEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFGPSTQL
PDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSG
IRSYAVVRKIDKLEGTSSPSQFTSLRATVSVITYNGYFQEYTLSINNKNESLWTMEREFN
LFSITTG
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggcgaatcagtcgtcctctcttccttctcctatctattgtgtttctttcaatcaagat
aatagtggttttgctataagctggaaagattccttcaaaatattcgattccactacaggc
agactctgctatgaacgagctgctggagcttttgttattgttgagatgttgtatagctca
gatctacttgccattgttggagctggtgaacaggcttctctatccccacggcgtctttgt
ttgttcaagaccacaacgggtttacctcttagggaattgaactttttaacttctatactc
gctgtccgtatgaacaagaaaagacttgttgttgtgctgctagagaaaacattcgtttac
gacttgaatacccttgtcatgcttgatactatcgacaccgtgccaaatcctaaaggtcta
tctgcattctctccatctcttgaaggctgctacttagctgttccagctagtgcgacgaaa
gggtcggttttggtgtataacgtcatggatttgcagtctcatagtgagatagatgcacat
cgttctccattggctgcgattgcactctcgtcaaatggaatgtacattgctacagcatct
gagcaaggaaccttgatccgagtccatcttgtttcggaagcaactaagtcatatagtttc
aggagaggaacatacccatctactatatactcactgtcttttggaccatcgacacagctt
ccggatatattaattgcaacgagttcttcaggctccattcatgccttctctttaagtttg
gccataaaccaaagaagcaaaaggtctaccagctttcttggatcagttcttccggacagc
gtgagtgatgcactggatccagctcatcatcatgtgcttcaaaacgcagtttcttctggg
attagaagttatgcagtggttaggaagatagacaaacttgaaggaacatcatctccatct
cagtttacatctcttagagcaacggtatcggtgattacttataacgggtatttccaggag
tatacgctaagtatcaataacaagaatgagtctttatggacaatggaacgtgaattcaat
ctcttctccataacaactgggtga

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