KEGG   Arabidopsis lyrata (lyrate rockcress): 9303867
Entry
9303867           CDS       T01578                                 
Name
(RefSeq) probable pectate lyase 16
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040  Pentose and glucuronate interconversions
aly01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    9303867
Enzymes [BR:aly01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     9303867
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 9303867
NCBI-ProteinID: XP_002867795
UniProt: D7ME84
LinkDB
Position
Unknown
AA seq 394 aa
MTLFTVSCLLVALFLCQSLVHAVNNGYYGYTPTVANYLPEKPQNIMNPVDSCWRLKSDWA
VNRKDLANCVVGFGSSTLGGKKGKLYVVTNPNDNAQNPQPGSLRYGVIQAKPLWITFAKD
MVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRS
SPTHVGHRQGSDGDAIAIFGSSNVWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDK
VMLLGHNDDFVQDVNMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSA
DPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDVFKNGAYFVPSGYGSISLP
YSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPCY
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgactcttttcaccgtttcttgcctcctcgtggcactattcttatgtcagtcattggtc
catgccgtaaataatggttattacgggtatacccccacggttgccaactacctccccgag
aaacctcagaacatcatgaatccggtggactcctgttggcggctcaagtctgactgggct
gtcaatcgtaaagacctagcgaattgcgtggttgggtttggttcatctaccttgggcggc
aagaaaggtaagttatatgttgtcacaaaccctaacgacaatgcacaaaaccctcaacca
ggttctttgcggtacggcgtgatccaagccaagccattgtggatcactttcgctaaggat
atggtcataaccctagagaatgagctcatggtcaatagctataagaccattgatgggaga
ggggcaaaagtggaaattgcatacggaccatgcattacgatacaagacgtgacgaacgta
atcgtgcacgggatcagtatccatgactgcaaaccagggaagtacggaatggtgaggagc
agcccgacgcatgtcggtcaccgtcagggatcggacggtgatgctatcgctatttttggg
tcgtcgaatgtttggatcgatcattgttacctagcaagttgtacggacgggctcatcgat
gtgatccatgcttccacgggaatcacaatttccaacaactatttcactcagcatgacaaa
gtgatgttgcttggacacaacgatgattttgttcaagatgtgaacatgaaagtgaccgtg
gcattcaatcattttggaccaggacttgtcgagagaatgccaagggtaagacgagggtac
gctcatgtggcaaacaatagatacgataaatggataatgtatgcaattggtggtagcgcc
gatcccaccatttttagtgaaggcaactatttcattgcttctgataaatctaacagcaag
gaggtgacgaagagagaagtaaaaggaggatggaacaattggagatggagaacctcaaaa
gatgttttcaagaacggagcttacttcgtaccttctggttatggcagcatttcgctaccg
tatagttctgctcagcgattcacagtcgctccaggaaacttggttccttctttaaccgca
gacgctggccctctaaactgcaaccgcaacggcccttgttattag

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