Arabidopsis lyrata (lyrate rockcress): 9304081 Help Entry 9304081           CDS       T01578                                  Name (RefSeq) phytochrome E   KO K12123   phytochrome E Organism aly  Arabidopsis lyrata (lyrate rockcress) Brite KEGG Orthology (KO) [BR:aly00001]  09190 Not Included in Pathway or Brite   09193 Unclassified: signaling and cellular processes    99995 Signaling proteins     9304081 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c HisKA PAS_4 PAS_9 Motif Other DBs NCBI-GeneID:  9304081 NCBI-ProteinID:  XP_002868009 UniProt:  D7MCW5 LinkDB All DBs Position Unknown AA seq 1116 aa AA seqDB search MGFESSSSAASNMKPLGDSKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSVISPPN YVPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHSGE FDKVKGLIGIDARTLFTPSSGASLAKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAG IVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTGYD RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP VKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDSSKLWGLVVG HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSA IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSL VDAGYPGAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHRPKDKDDAGRMHP RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSCRPVLSGNDVARDANELTSFV CEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLANEIVQEESRAVLE SLLCKALQGEEEKSVMLKLRKFGQNNHPDSSSDVCVLVNSCTSRDYTEKIIGVCFVGQDI TSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEVIG KMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVTESSLVEFFSKEGRYIEASLTANK STNIEGKVIRCFFFLQIINKESGLSCPELKESAQSLNELTYIRQEIKNPLNGIRFAHKLL ESSEISASQRQFLETSDACEKQITTIIEGTDLKSIEEGKLQLETEEFRLENILDTIISQV MILLREGNLQLRVEVAEEIKTLPLYGDRVKLQLILADLLRNIVNHAPFPNSWVAIYISRG QELSRDNSHYIHLQFRMIHPGKGLPSEMLSDMFETRDGWDTPDGLGLKLSRKLLEQMNGR VSYVREDERCFFQVDLQVKTMLGVETRGTEAGSSIK NT seq 3351 nt NT seq  +upstreamnt  +downstreamnt atgggattcgagagctcttcctctgctgcaagcaatatgaaacctcttggagattccaaa cctcaaaaatccaacactgctcaatactctgttgatgctgctctctttgctgatttcgac caatccatttactccggcaagtcttttaactactccaaatctgtgatttcacctcctaat tacgttcctgatgaacacatcactgcttacttgtctaatatccaaagaggcggtcttgtt cagccctttggttgtttgattgctgttgaagaacctagttttaggatccttggtgttagt gagaactcctctgagtttcttggtttgttgtctcttgcttccacctctcactctggtgag tttgataaagtcaagggtttgattggaatcgatgcaaggacgctttttactccttcttct ggagcttctttggctaaagctgcttcctttactgagatttcgttgctgaatcctgttttg gtccattctaggacgacccaaaagcctttttatgctatacttcacaggattgatgcaggg atagtcatggatttggagcctgctaaatccggtgacccggctttgacccttgcaggcgca gttcagtctcagaagctcgccgttagggccatttctaggctgcagtcgcttcccggggga gatattggtgcgttttgtgatactgttgtggaagatgttcagagacttaccggttatgac cgtgttatggtttatcagtttcatgaagatgatcatggtgaagttgtttctgagattaga aggtctgatttggagccttatttgggtttacattatcctgcaacagatattcctcaggct gctcggttcttgtttaaacagaatcgtgtccggatgatttgtgactgcaatgcaactccg gttaaggttgttcagagtgaggaactcaagagaccactttgtttagttaattctactcta agagctcctcatggctgccatacgcagtatatggcgaatatgggctctgtagcttctctt gcactcgctattgtgataaaaggcaaagattcgagcaagctttggggattagttgtaggt catcattgttctcctagatacgttccattcccgttgcggtatgcttgtgagtttctgatg caagcatttggacttcagcttcaaatggaacttcagttagcatcacagttggctgagaag aaggctatgcgaacgcagaccttgttgtgcgatatgcttctccgtgatactgtttccgct attgttacacaatctccgggtattatggaccttgtgaaatgtgatggagctgcgttatat tacaaggggaaatgttggttggtcggtgttactcctaatgagtcacaagttaaagacttg gtgaattggctggtggagaatcacggtgatgattccacgggtttaacaactgatagtttg gtggatgcgggataccctggtgccatctcacttggagatgcggtttgtggtgtggctgca gcgggaatttcttcaaaagattacttactttggttcaggtccaatactgcaagtgcaatc aaatggggaggagctaaacatcgtccaaaggataaagatgatgccggaagaatgcatccg aggtcatcgtttaaagcctttcttgaagttgcgaagagcaggagcttgccgtgggaaatc tcagaaattgatgctatccattccctaagacttataatgagagagtcatttaccagctgt aggccagttttgtctggtaatgacgtagcaagagatgctaatgaactaacttcttttgtg tgtgaaatggttagggtgattgaaaccgcaactgctcctatttttggggttgattcttcc ggatgtattaatggttggaacaagaaaaccgccgaaatgacgggattactagctagtgaa gccatggggaagtcacttgccaatgagattgttcaagaggaatcacgcgcagttcttgaa agtctcttgtgcaaagccctacaaggtgaagaggagaaaagtgtaatgctaaaactgaga aagtttggtcaaaacaatcatccggattcttcttctgatgtgtgtgttctcgttaactcc tgcacgagtcgggattatactgaaaaaatcatcggtgtctgcttcgttggtcaagacatc actagtgagaaagcaatcacagatagattcatcagattgcaaggagattacaagactatt gttcaaagcttaaatccgttgattccaccgatatttgcttcagatgagaatgcttgttgt tctgagtggaacgcagccatggaaaagcttaccggatggtcaaaacacgaggtgattggg aaaatgctacccggtgaagtctttggagtcttttgtaaagtgaaatgccaagattcgctt acaaagttcttgatctctctgtaccaaggaattgctggtgataatgttactgagagttca ctggttgagttctttagtaaggaagggaggtacatagaagcatccttaaccgcgaacaag agtacaaacatcgaagggaaagttataagatgtttcttcttcctgcagattatcaataaa gaatcgggtttgagctgcccagaactgaaagagagtgctcaaagcctcaacgaattaact tacataagacaagaaatcaagaatcctctcaacggtatccgatttgcccataagcttctt gaatcctcagagatttcagctagccaaaggcagtttctggagactagtgatgcttgtgag aagcaaatcactacaataatcgaaggcacagacttgaaaagcattgaggaaggcaagttg caattggaaacagaggagtttcgacttgaaaacatcttggacacaatcattagccaagtg atgattttactgagagagggtaacttacaactcagggttgaagtcgccgaggagatcaaa acgctgcctctctatggtgacagagtaaagctccagctcattcttgctgatcttctacgc aacattgtcaatcatgcgccgtttccaaatagttgggtcgcaatctatatctcacgaggg caggagctttcacgtgacaatagtcactatatccatctgcagttcaggatgatacatcca gggaaaggacttccttcagagatgctaagtgatatgtttgagactcgagatggatgggac acgcctgatggtttagggcttaagctttcacggaaactattggagcagatgaatggtcgt gtgagttatgtcagagaagacgaacggtgtttctttcaggtggatcttcaagtgaagaca atgttaggggttgagactagaggaacagaggctggttcaagcataaagtag

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