KEGG   Arabidopsis lyrata (lyrate rockcress): 9304230
Entry
9304230           CDS       T01578                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 3
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9304230
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aly01002]
    9304230
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9304230
   04121 Ubiquitin system [BR:aly04121]
    9304230
Enzymes [BR:aly01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     9304230
Peptidases and inhibitors [BR:aly01002]
 Metallo peptidases
  Family M67
   9304230
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Others
   Others
    9304230
Ubiquitin system [BR:aly04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    9304230
SSDB
Motif
Pfam: USP8_dimer JAB Prok-JAB
Other DBs
NCBI-GeneID: 9304230
NCBI-ProteinID: XP_020872640
LinkDB
Position
Unknown
AA seq 422 aa
MKIDLNKVARKIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISET
IPFHRDYQASLPQERLGSRKRLRAVINELESLKPEFNRLVDKLNRVEDESRLVGSDLPIV
SYSSDAVEWPPAHKASYSGPDINKPLPTSQPSWTYNNNLTSSSNRTQIDQQFQKLSFDFL
PPNQATLSRHSFLGPNGLKSQWVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSGSSASHN
GDSQEVSTLNSVLSLDDGRWQQHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQVHQE
LAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGV
LAGSLKNRVFHITTLIIPKQESTSDSCQTLNERNIRSTGQTLSISLGLDSYTSYTNLLHV
IS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaagattgatctgaacaaggtggctcgtaaaatcgaagtcgataatcgtatccctctt
cgtaattactaccgtatcgccgataatctcctccgacaggccagtatatatcgggaagag
aagaatgtggtggatttgtatatcatgcttcttagatattcaagtttgatttctgaaaca
attcctttccatcgagattaccaggcatcgcttccacaagaaagacttgggagtaggaag
aggttgcgtgctgtaatcaatgagctcgagtctctgaaaccggaattcaaccggctagtt
gataagctgaacagagttgaggatgaatcccgtctggttggaagtgatctcccgattgtt
tcatatagttcagatgctgttgagtggcctcctgctcataaagcttcatactccggacct
gatattaacaagcccttaccaacatctcaaccatcctggacgtataacaataatctgaca
tcatcttcaaatcgtacacagatcgatcagcaattccagaagctatcttttgattttctg
cctccaaaccaagcaaccttgtcaaggcattcatttctaggtccgaatggtcttaaaagt
caatgggttgcacccaagtcggagataaaggttcaatatccgagtaatacggattggggt
tctgcagacaattctggtttaattgaagctggaccaagcggttcctcagcatcacataat
ggtgattctcaagaagtctcaacgctgaactctgtgctctccttagatgatggtcgatgg
cagcaacattctgaggcagtaaattcccagtttattagtgatgcaactgaagacccgttt
cagtttgtcggtatgaagcaaccttcccctcctcccgtgcttgcccaagtgcatcaagag
ttagcccaaatttgcccatctaaagttgctgatcctagaccaggacctgcaattccttct
ctagaaggaaaagagggtagcaattcttatcagcatttgcatgtgcccgtgcgcataatg
gatgatttcctaaggctagctcggtcaaacacagaaaggaatttagaaacttgtggagta
cttgctggctctctgaaaaacagggtttttcatatcactactctcataatcccaaagcag
gagtctacctcagattcttgccaaacactaaacgagagaaatattcgaagtacaggacag
actctctctatttcccttgggttggattcatacacatcctacacaaacttgcttcatgtc
atcagttga

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