Arabidopsis lyrata (lyrate rockcress): 9304275
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Entry
9304275 CDS
T01578
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9304275
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
9304275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box_5
F-box
LRR_At1g61320_AtMIF1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
9304275
NCBI-ProteinID:
XP_020872794
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MRGHDRINNCLPEELLLEIFRRLESKPNRDACSLVCKRWLSLERYSRTTLRIGASFSPDD
FISLLSRRFLHITSIHVDERLSVSLPSLSPSPKRKRGRDSSSPSSSKRKKLIGNKHSGAE
NVESCSLTDAGLTALADGFPKVENLSLIWCPNVSSVGLCSLAEKCISLKSLDLQGCYVGD
QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCAKSLKSIGVAASAKITDLSLEAVG
SHCKLLEVLYLDSEYIHDKGLIAVAQGCNHLKNLKLQCVGVTDKAFAAVGDLCTSLERLA
LYSFQNFTDKGMRDIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIG
TRGIEAIGNFCPRLKELALLYCQRIGNSALQEIGKGCKSLEMLHLVDCSGIGDSAMCSIA
KGCRNLKKLHIRRCYEIGNKGIIAIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQL
NVSGCNQISDAGISAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHI
TDTGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWKVTERTTRRAG
SVISYLCMDL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtcacgatcggattaacaattgcttgccggaggaactactcctcgagatattc
cggcgacttgaatcgaaacccaaccgcgacgcttgctctctcgtctgcaaacgatggcta
tctctagagcgatatagccgaaccacgcttcgtatcggcgcttcattttctcccgacgac
ttcatctcccttctctctcgccgcttcctccatattacatccatccacgtcgacgagcgt
ctctccgtctcccttccttccctctctccttcccccaaaagaaaacgtgggagggacagt
tcgtcgccatcgtcgagtaagcggaagaaattgattggtaataaacattctggagctgag
aatgttgagtcttgtagcttgactgatgcgggtttgactgctcttgcggatggatttcca
aaagtagaaaacttgagcttgatatggtgccctaatgtttcaagtgtgggtttgtgttcc
cttgctgagaagtgcatttcacttaaatctttggatttacagggttgctatgttggagat
caaggcttagcagctgttggaaagttttgtaagcaactcgaagaactaaatctgcgcttt
tgtgaaggcttaactgatgttggagttattgaccttgttgttggttgtgcgaagtcctta
aagtctattggtgttgctgcgtcagcaaaaattacagatttatctctggaagcagttggt
tctcactgtaaattactagaagttctgtatttggattctgaatacatccatgataaagga
ttgatagcggtggctcagggatgcaaccatttgaaaaatctgaagcttcaatgtgttggt
gtgacagataaagcatttgctgcagtgggagacttgtgtacttcgttggagcgattggct
ttgtatagctttcagaattttactgacaagggcatgcgggacatcggtaaagggtctaag
aagttgaaagatctcactctaagtgattgctactttgtgagttgcaaaggtttagaagct
attgctcatggttgtaaggaacttgagcgtgttgaaattaatggatgccacaacattggt
acacgtggaatagaggcaattggaaatttttgcccgcgcctcaaagagttagctttattg
tattgccaaaggattggtaattccgctcttcaagaaattggaaaaggctgtaaatcccta
gaaatgcttcacttagtagactgctcaggcattggagacagcgctatgtgcagtattgct
aaaggctgtcgcaacctcaagaaacttcatatccgcagatgctatgagattggaaacaaa
ggaattatagctattggaaagcattgcaaatcactaaccgagcttagtctccggttttgc
gataaagttggaaataaagcattgatcgccattggaaaaggttgctccttacaacaacta
aacgtaagtggttgtaatcaaatcagtgatgctggaatatcagcaatcgccagaggctgt
cctcaactcactcacctcgacattagtgttcttcagaacattggagacatgccgttggct
gagcttggagaaggatgtccaatgctgaaagacttggttttgtcccattgtcaccatata
acagacactggtctgaaccatcttgtacagaaatgcaaacttctggagacttgtcacatg
gtttactgcccagggatcacttccgctggagtggctacagtcgtctcgagctgtccacac
atcaagaaagtgttgatagagaaatggaaagtgaccgagaggacgacaaggagagctgga
tctgttatctcttatttatgcatggatctgtag
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