Arabidopsis lyrata (lyrate rockcress): 9304312
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Entry
9304312 CDS
T01578
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
9304312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9304312
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
9304312
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
9304312
NCBI-ProteinID:
XP_020874500
LinkDB
All DBs
Position
Unknown
AA seq
1479 aa
AA seq
DB search
MVFLSRKKPPPPQPPSSSSAAPSLKIPQPQKESVEPDAVENMTAILAEVGCTLMNPYGPP
CLPSDLHAFRRNLTTRLSSCSANPGERDHVGALRSVFVAGFSSYIQSPSNLRRVLSSSSS
TTNRDESLARNLLLVSPIQLDIQEMLLEKLPEYFDVVTGCSLEEDVARLIINHFRWLDFI
VNPNLFTDKLMQVLSICPLHLKKEIIGSLPEIIGDHNCQAVVDSLEKLLQEDSAVVVPVL
DSFSNLNLDDQLQEQAITVAISCIRTIDAEHMPYLLRFLLLAATPANVRRIISQIREQLK
FTGMSQPCASQNKLKGKVPACNAEGSILHALRSSLRFKNILCQEIIKELNSLEKPRDFKV
IDVWLLILMYMNGDPIRKSIEKIFKKKVVDECIQEALLDQCIGGNKEFVQDNFASFVSLA
EHLLSCKEERAREIGSHIYTRLFEGFSDNYSRQEILGALVTHVGSDNKFEVSSVLEMMTA
LVKKYALQLLPFSSHINGILDYLEGFTIENLHKVYEVFSLLALSARASGDSFRSSISNEL
MMIVRKQVSHPDLKYKKMGLVGSLTIVSSLGDANSVPDFSSSQVSDCGEILELLKTSVDS
CRQSNLALIMFYDEFATILSQKLLQPEIMEWIGKHLGEFESLFLADLENGKMADKGSYSG
LEGDLWMNLDGSISPICLNILALASSSSESCCLQILPSNFLLLSTVERLTNDGSLAGIDA
LLGCPLHLPSSKYFAAASWQSLAKKQKEILSLSLYYAANWIRELLNAFSSQIDEKIGCIS
QATEKDVTTKLLKRLRNLVFLESLLSNLITLSPQSLPELHPYSESHVENPGKKNEKRKLD
DDASQRKGSMKNNLKKSKHSNVNEKLRQPTIMDAFKKAGAAMSQSQTQLHGTPSLPSLNG
STAAGSVDDNCSDNESLIVKIPQVSSALEAQRFKFRPLLPQCLSILNFPKVLSQDIGNPE
YKAELPVYLYLLHDLHNKLDCLVPHGKQQPFKRGSATGYFGRFKLVELLSQIKGLFPSLR
IHLNIAISLLIKGDETSQTSWRDEFAMAGNPNMSNIVVSESLVYTMVCKEVLYCFSKMLT
LPEFETDKSLLLNLLQAFQPTEIPVASFPDFQHFPSPGTKEYLYIGVYYFFEDILNKACS
FSFDLAFECLLILQLVVTSVQKYIGKVSEEANKKRNPGHFQGLVPSLHAKLGTSAEKLLR
HKWVDESTDNKGLKNKGEMVQTILRIYLEASGSTSDLLDELACNILPQASLSKSTGEDDD
ACDHEFPTLCAATFRGWYKTLHEENLAILNKMVKTVSSEKRENCQSEATEAHLKNIQKTV
NVVVSLVNLCRSHEKVTIHGMAIKYGGKYVDSFLKVFDFLEAHFQDHKELVIQLVKDLQK
ATRTLQTLCSEAKGMKQTAITSKIPATKRSLERFLFHVKALLHTTSRGSNFWMGSLKHKD
LRGQIVSSQAYVDNEADEVEETMSGEEEPMQEDEIPLTP
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctctctcgcaaaaaacctccaccgccacagcctccgtcgtcgtcctcagct
gctccgtctctcaaaattccccagccgcaaaaggaatccgtcgagcccgacgcggtggag
aatatgactgcgattctagcggaagtcggatgcacactgatgaatccgtacggtccgccg
tgccttccttccgatttacacgctttccgccgcaatctcactactcgcttatcgtcttgc
tccgccaatcccggtgagagagatcacgtcggtgctcttcgctcagttttcgtagctgga
ttttcatcgtacattcaatctccgagtaatcttcgtagagtgctttcttcttcttcttca
acaactaatagagacgagagtttagctcgaaatctcttgcttgtatctccgatccaactt
gatattcaggaaatgctactcgagaaacttccggagtactttgacgttgttacaggatgt
tctttggaggaggatgttgctcgcctaatcatcaatcatttccgttggttagacttcatt
gttaatcccaatttgttcaccgataagctgatgcaagttctatcaatttgtcctctgcac
ttaaagaaagaaatcattggatccttgccagagattattggggatcacaactgtcaagct
gtggttgattctttagaaaagttgcttcaggaggattctgctgttgttgttccagtgctt
gattctttctccaacctcaatttagatgatcaattgcaagaacaggcgattacagtagca
atatcatgtattagaacaatagacgcagagcacatgccgtatctacttaggtttttgctt
cttgctgctactccagcaaatgttagaagaatcatctcccagatacgcgaacagttgaaa
ttcaccggaatgtcacaaccttgtgcttctcaaaataaactcaaaggaaaagtacctgca
tgtaatgcagaaggttctattctccatgctttaagatcaagccttcgatttaagaatata
ctctgtcaagaaatcataaaggagctgaatagtctggagaaacctcgggatttcaaggta
atcgatgtatggctgcttattctcatgtacatgaacggggatcctatccggaagagcatc
gagaagatatttaagaagaaagtggttgatgaatgcatacaagaagccttgcttgatcaa
tgtataggtggtaataaagagtttgtgcaggataattttgcgtcatttgtttctttggct
gaacacctcttgtcatgcaaagaagaaagggcaagggaaattggctctcatatctatact
cgtctttttgaagggttttctgacaattattcaagacaagagattctaggtgcccttgtg
acacatgtgggatctgataacaaatttgaggtcagttctgtcttggagatgatgacagct
ctggtgaaaaaatatgcactgcaactccttcccttttcttcccacataaatggtattttg
gactacttagagggatttacaattgaaaatttgcataaggtctatgaggttttcagtctc
ctcgcactatcagctcgtgcaagtggcgattcttttcgatcttcaatttcaaatgaactt
atgatgatagtaaggaagcaggttagtcatccagacctcaagtacaaaaagatgggctta
gttggaagtcttacaattgtttcgtcacttggggatgcaaatagtgttcctgacttctca
tcatcgcaggtttcagattgtggggagattttggagctcttaaagacatctgttgactct
tgcagacagtctaacttagccctaattatgttctatgatgaatttgctaccattcttagc
caaaaattacttcaaccagaaattatggagtggattgggaagcatctgggggaatttgag
tcgctatttctagccgatcttgaaaacggaaaaatggctgataagggttcatattctgga
ctagaaggggatctttggatgaacttggatggtagtatatcaccaatctgtttgaatatt
ttggccctggcatcttcatcctcagagtcctgttgtctgcaaattcttccttcaaatttt
cttttgctatcaactgttgagaggttgacaaatgatggatcccttgccgggattgatgct
ctgctcggatgccctttgcaccttccctcttcaaagtactttgctgcagctagttggcag
tcgctggcaaagaagcagaaagaaatcctctctctctctttatattatgctgcaaactgg
atacgagaactcctgaacgcctttagttcccaaattgatgaaaaaattggttgcattagt
caggctacagaaaaggatgttacaacaaagcttctaaagcgactcagaaatttagtattc
ctggaaagcttattgagcaatttgattacactatctcctcagtctctaccagagctccac
ccttattctgaatctcatgtagaaaatccggggaagaagaacgagaaaaggaagctagac
gatgatgcctcccaacgcaagggaagcatgaaaaataacttgaaaaaatcaaagcactca
aatgtgaatgaaaagctgcgacagccaactattatggacgcattcaagaaagcaggagca
gcgatgagtcaaagtcaaacacagctacatggaaccccttccctcccatctttaaatggc
agcacagcagcagggtccgtggacgacaactgttctgataatgaatctttaattgtgaag
attcctcaagtttcctcggcacttgaagctcaaagattcaagttcaggcctcttcttcct
caatgcctttccatcttaaattttccaaaggttctaagccaagacataggcaaccctgag
tataaagctgagctacccgtgtatctgtatctcttacatgatcttcacaacaagctggat
tgtcttgttcctcatggtaaacaacaaccttttaaacgtggaagtgctacaggttatttc
gggagattcaaattggttgaacttctcagtcaaattaaaggactttttccaagcctcagg
atacatttgaatatagctatttccttgctaataaaaggtgatgaaacttctcaaactagt
tggagagatgagtttgctatggccggaaatccgaacatgtccaatattgtggtttctgaa
tctctggtttacacaatggtgtgcaaagaagttttatactgtttcagcaagatgttgacc
ctccctgagtttgaaacagacaagtcactgctgctgaatcttcttcaagccttccagcca
actgaaataccagtagctagctttccggactttcaacatttcccgtcacctgggacaaag
gagtacttgtatattggcgtttattatttctttgaagatattttgaataaagcatgttcc
ttctcctttgatctggcctttgaatgtcttctcattctacagttggtggtgacctctgta
caaaaatatattggtaaggtatctgaagaggctaacaaaaagagaaacccgggtcatttt
cagggtcttgtacccagcctacatgccaaactgggaacttctgctgagaaacttctcagg
cataaatgggtcgatgaaagtactgataataagggtttaaagaacaaaggtgaaatggtt
cagaccatattgcgaatatacctggaagccagtggatccacatctgatttgcttgatgag
cttgcttgtaacattttacctcaggcgtctctatccaagtcaacaggagaagatgatgat
gcctgtgatcatgaattccctaccctatgcgcagctactttcagaggatggtacaagaca
ttgcatgaagaaaatcttgcaattctcaacaaaatggtgaaaacggttagctcagagaaa
cgggaaaactgtcaatctgaagctactgaagcacacttgaaaaacattcagaaaactgta
aatgtggtagtctctttagtcaacttgtgccgatctcatgaaaaggttacaatccatggc
atggctatcaagtatggtgggaagtatgtggactcatttctaaaagtttttgatttcttg
gaagcacattttcaagatcataaagaactagtcatccagttggtcaaagatctccagaag
gctacaagaacattacagactctatgttctgaagccaagggtatgaaacaaacagccatt
accagcaaaataccagcaacaaagagatccttagagcgttttttgtttcatgttaaggct
cttctccatacaacatcacgcggctccaacttctggatgggtagcttgaaacacaaggac
ttgagagggcaaatagtgagttctcaggcttatgtagataacgaagcagatgaggttgaa
gaaaccatgtccggagaagaagaacccatgcaagaggatgaaattcccttgacaccttag
DBGET
integrated database retrieval system
