Arabidopsis lyrata (lyrate rockcress): 9304379
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Entry
9304379 CDS
T01578
Name
(RefSeq) protein transport protein SEC23 isoform X1
KO
K14006
protein transport protein SEC23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9304379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9304379
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
9304379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
9304379
NCBI-ProteinID:
XP_020872742
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MAEMANMDPEGMDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHSDIPDLPYAPLKCR
TCVAVLNAFARVDFNAKIWICPFCHQRNHFPVHYHSISEINLPGELYPQYTTVEYTLPAS
VDPRTGAADQVPPPVFVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAHV
HELGFSEMSKVFVFKGNKEVTKDQILDQLGLGSSSRRAPTSGFPKGAQNGFQSSGIDRFL
LPASECEYTLDLLLDELQSDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALV
GGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFAS
ALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCS
KDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSNAP
GAVNPQLYLQFVTSYQNPEGKSLLRVTTVTRQWVDTAVSTEELVQGFDQETAAVVMARLT
SLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLNPYFSLFPQFMFNLRRSQFV
QVFNNSPDETAYFRMLLNRESISNATVMIQPSLTSYSFNAPPQPALLDVASIAADKILLL
DAYFSVVVFHGMTIAQWRNMGYHHQPEHEAFAQLLQAPQEDSQMLVQERFPVPRLVVCDQ
HGSQARFLLAKLNPSATYNNANEMSAGSDIIFTDDVSLQVFFEHLSKLAVQS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggcgaacatggatcccgaaggtatggatggagttcgtatgacttggaac
ctttggcctcgcactaaggttgaagctagcaagtgtgtgattcctctcgccgcttcaatt
tctccgatccgtcgtcactccgatatccctgatctcccttatgctcctctcaagtgccgg
acttgtgttgctgttctcaacgctttcgctcgtgttgatttcaacgctaagatctggatc
tgccctttttgccatcagaggaatcatttcccggttcattaccattcgatctctgagatt
aatctccctggtgagctttatcctcagtacactactgttgaatacacgttgccggcttct
gtcgatccgagaactggtgctgctgatcaggtgcctccgcctgtgtttgtgtttgttctt
gatacgtgtatgattgaggaagaattgggatatgccaaatcggcgcttaagcaggcgatc
gggttgcttccggagaatgctttggttgggtttgtgtcgtttggtactcaggctcatgtc
catgaattggggttctctgagatgtctaaagtttttgtctttaaaggcaataaagaagtt
actaaggatcaaattttggatcagttggggcttgggtcttcctccaggagagctcctact
tctgggtttcctaaaggagcgcaaaacggattccagagttccggtattgacagattcctg
ttgcccgcttcggagtgcgaatacacactggacttgcttttggatgagctccaatcagac
cagtggcctgttcagccaggtcatcgtccccaacgatgcacaggggttgcattgagtgta
gctgcaggattgcttggagcttgcttacctggaactggggctagaattgtagctttggtt
ggaggtccatgtacagagggccctggaacgattatctcaaaggatttgtcagatcctgtg
cgctcccacaaagatctagataaagatgctgctccttattataaaaaagctgtcaagttt
tatgatagtattgcaaagcagcttgtcgctcagggtcatgtgttagaccttttcgcctct
gcacttgatcaggttggggttgctgaaatgaaagtagccgttgaaagtaccggtggtctc
gttgttctgtctgaaagttttggccattctgtatttaaagattccttcaagagggtgttt
gaagatggcgagcagtctcttggtctctgcttcaatggcacgcttgagatcaattgttca
aaagacatcaaaattcaaggggttatcgggccttgctcatcattagaaaagaaaggtccc
aatgttgccgacacagtcattggagaggggaataccagtgcttggaagttgtgtggcctc
gacaagagtacctgcttgactgtattctttgatctatcttcaaccgggtcaaatgctcct
ggagctgtaaatcctcagttgtatttgcagtttgtcacaagttaccaaaaccctgaaggt
aaaagtttgctccgggttacaactgtaaccagacagtgggtggatactgctgtgagcaca
gaggaacttgtgcaaggctttgaccaagaaactgctgctgtggttatggcaagattaact
tccttaaaaatggaaacagaggagggatttgatgctactcggtggctagatcggactctc
attcgtctgtgttcaaaatttggtgaatatagaaaggatgatccaacctcgtttacgctg
aatccctatttttcattgttccctcaattcatgtttaacttgcggcggtcacagtttgtt
caggtttttaacaacagtcctgatgaaaccgcatacttccgcatgctgctaaaccgggaa
agtatttcaaatgcaactgtcatgatccaaccatctctgacgtcatattcattcaatgca
ccacctcagccagctttgctggatgtggcttccattgcagctgacaagattcttctatta
gatgcatattttagtgttgttgtcttccatggaatgactatagcgcaatggcgaaacatg
ggttatcatcatcagcctgaacatgaggcctttgctcagttattgcaagctcctcaagag
gattcccagatgttagtccaggaacgtttcccagtcccgagattagttgtgtgtgatcaa
catggatcacaggcaaggtttttattggctaagctgaatccatcagcgacttacaacaat
gcaaacgagatgtcagctgggtcagacataatcttcactgacgatgtgagcctgcaagtc
ttttttgagcatctttcgaaactggccgtgcaatcctga
DBGET
integrated database retrieval system
