KEGG   Arabidopsis lyrata (lyrate rockcress): 9304401
Entry
9304401           CDS       T01578                                 
Name
(RefSeq) serine hydroxymethyltransferase 5 isoform X2
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00260  Glycine, serine and threonine metabolism
aly00460  Cyanoamino acid metabolism
aly00630  Glyoxylate and dicarboxylate metabolism
aly00670  One carbon pool by folate
aly01100  Metabolic pathways
aly01110  Biosynthesis of secondary metabolites
aly01200  Carbon metabolism
aly01230  Biosynthesis of amino acids
aly01240  Biosynthesis of cofactors
aly04981  Folate transport and metabolism
Module
aly_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    9304401
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    9304401
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    9304401
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    9304401
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    9304401
Enzymes [BR:aly01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     9304401
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 9304401
NCBI-ProteinID: XP_002868329
UniProt: D7MHA2
LinkDB
Position
Unknown
AA seq 470 aa
MESVSSWGNTPLVSVDPEIHDLIEKEKHRQCRGIELIAAENFTSLAVMEALGSALTNKYS
EGMPGNRYYGGTEFIDEIESLCRSRALEAFHCDPEKWGVNVQPYSGSPANFAAYTALLQP
HDRIMRLDLPSGGHLTHGYYTSGGKNISATSIYFENLLYKVDSTTGYIDYDKLEEKAMDF
RPKLIICGGTSYPREWDYARFKVVADKVGAFLLCDMAHNSALIAAQEAADPFEYCDVVTT
STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDKKINFAVFPALQSGPHNNKIGALA
VALKQAMAPGFKVYAKQVKANAACLANYLMGKGYCIVTGGTDNHLLLWDLRPLGLTGNKV
EKVSELGYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLSRAVALTL
DIQNQYGKVLKDFNKGLVNNKEIDELKTDVEKFMYAFEMPGSLISETKND
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggaatcagtctcttcttggggaaacacgcctcttgtctccgtcgatcccgagatccac
gacctaatcgagaaggagaaacatcggcaatgtcgaggaatcgaactcatagccgccgag
aatttcacttccttggctgtcatggaagctcttggaagtgccttaaccaacaaatactcg
gaaggtatgcctggtaatcgttactacggaggtaccgagttcatcgatgagatcgagagt
ctctgccgctcacgcgctctcgaggctttccattgtgatccagagaaatggggcgttaat
gttcagccttactctggttctcctgcaaacttcgccgcctacacggccttgctccagcct
catgatcgtatcatgaggcttgatctgccttcaggtggtcatctaacgcatggttactat
acctctggtgggaagaatatatccgcgacctcgatctacttcgaaaaccttctgtacaag
gtggattccaccactggttacattgattacgacaagcttgaggagaaagcaatggatttt
aggcctaagttaatcatctgtggaggcacttcttaccctagggaatgggattacgcgagg
ttcaaagttgtcgcggacaaggttggagcttttttgctttgtgatatggctcacaacagc
gccctcattgctgctcaggaagctgcagacccgttcgagtactgtgacgttgtgacaacc
tcaactcacaagagtttgagaggtccaagggctggtatgatcttttatagaaagggccca
aaaccagccaagaagggccaacccgagggtgaagtctacgattttgacaaaaaaatcaac
tttgcggtgttccctgcgcttcaaagtggtcctcacaataacaagattggtgctctagct
gttgcgttgaagcaggctatggctcctggtttcaaggtttatgcaaaacaggtgaaagcc
aatgctgcttgccttgcaaactacctaatgggaaagggatattgtattgtaaccggtgga
actgataaccaccttcttctttgggatcttcgccctcttggattgaccggcaacaaggtt
gagaaggttagtgaattgggctacattactttgaacaggaatgcggtattcggagacact
agttttcttgctcctggaggtgtaagaatcggtacacccgcgatgacatcgagaggattg
gtggagaaggactttgagaagataggagagttcctgagccgtgccgtggcactcacgttg
gacatccagaatcagtacggtaaggtgttgaaggactttaacaagggtttagtgaacaac
aaggagatcgatgagctcaagactgatgtcgagaaattcatgtatgcttttgaaatgcct
ggatctctcatctctgagacaaaaaacgattag

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