Arabidopsis lyrata (lyrate rockcress): 9304475
Help
Entry
9304475 CDS
T01578
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00531
Glycosaminoglycan degradation
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
9304475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aly00536
]
9304475
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
9304475
Glycosaminoglycan binding proteins [BR:
aly00536
]
Heparan sulfate / Heparin
Enzymes
9304475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
9304475
NCBI-ProteinID:
XP_002870409
UniProt:
D7MHN4
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MGCRQIWIIVLFLCVFQFLDCTVSSAVEETGTVSVYGRAAVGTIDEDFICATLDWWPPEK
CDYGTCSWDHASILNLDLNNTILQNAIKAFAPLKIRIGGTLQDIVIYETPDQKQPCLPFT
KNSSILFGYTQGCLPMRRWDELNAFFRKTGARVIFGLNALSGRSIKPNGEAIGAWDYTNA
ESFIRFTAQNNHTIDGWELGNELCGSGVGARVAANQYAIDTINLRNIVNRVYKNVSPMPL
VIGPGGFFEADWFTDYLNKAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAITFR
SVKNIIKKSSTKAVAWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQS
LIGGNYGLLNTTNFTPNPDYYSALIWRQLMGRKALFTTFSGTKKIRSYTHCARQSKGITV
LLMNLDNTTTVVAKVELNKTFSLRHTKHMKSYKRATSQLPQDPNGEIQREEYHLTAKDGN
LHSQTMLLNGNALQVNSTGDLPPIEPIHINSTEPITIAPYSIVFVHMRSVVVPACA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtcgtcaaatttggatcatagttttgtttctttgtgtgtttcaattcttggac
tgcaccgttagctccgccgtagaagagactgggacggtgtctgtgtacggaagagccgcc
gtgggaacaatagacgaagacttcatttgcgccaccttagactggtggccaccggagaaa
tgtgactacggcacttgtagttgggaccatgcttccattcttaatctggacttgaacaac
actattcttcaaaatgcaatcaaagcatttgctcctttgaaaataagaataggaggaaca
ttacaagacatagtgatatatgagacaccagatcagaagcaaccgtgtcttccttttacc
aaaaactcttcaattctctttggttacacacaaggatgtctacctatgcgtcgatgggat
gagctcaatgccttctttcgaaaaaccggagctagagtcatctttggactgaatgcactc
tctgggcgttccataaaaccaaacggcgaagccataggagcctgggattacaccaatgct
gaatcattcatccggtttacagcacagaataaccacaccatcgacgggtgggagctcggc
aatgagctgtgtggaagtggtgttggtgcacgagttgcagcaaatcagtatgctatagac
accataaatctacgaaacattgtgaaccgggtttacaagaatgtgagtcccatgccgttg
gtgataggtccgggtggcttctttgaagctgattggttcacggattacttgaacaaagca
gaaaactctctcaatgctactactcgccacatctacgatctcggtccaggagtcgatgaa
catctgatagaaaagattcttaacccttcatatctggaccaagaggcaataacgtttcgc
agcgtcaagaacataattaaaaaatcctcaaccaaggccgtggcatgggttggtgaatct
ggtggtgcctacaacagcgggcggaatcttgtctctaatgctttcgtgtatagtttctgg
tacctagaccagcttggaatggcatcgctttatgatacaaaaacatactgcagacagtct
ctgatcggaggaaactatgggctgctaaatactactaacttcacaccgaatccagattat
tacagtgctctgatctggcgacaacttatgggaagaaaggcattgttcacaaccttttct
ggaaccaaaaagatacgttcatacacacattgtgcaagacaatcaaaagggatcacagtt
ttactgatgaaccttgacaacactacgacggttgtagcgaaagtagagttaaataagact
ttcagtcttagacatacaaagcacatgaagtcttataaaagagcaacttcccaacttcca
caggatcctaatggggaaatccaaagagaagagtaccatttgacagcaaaggatggaaac
ttacacagtcagactatgctactcaatggaaatgctcttcaggttaattcgacaggtgac
ttacctcctatagagccgatacatataaattcaacagagccaataacaatagctccatat
tccattgtgtttgtgcatatgcggagtgttgttgtacctgcatgtgcttaa
DBGET
integrated database retrieval system