Arabidopsis lyrata (lyrate rockcress): 9304638
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Entry
9304638 CDS
T01578
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03060
Protein export
aly04141
Protein processing in endoplasmic reticulum
aly04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
9304638
04141 Protein processing in endoplasmic reticulum
9304638
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
9304638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9304638
04131 Membrane trafficking [BR:
aly04131
]
9304638
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9304638
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
9304638
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP70 / DNAK
9304638
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
9304638
Autophagy
ER-phagy
ER stress-related proteins
9304638
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9304638
Exosomal proteins of other body fluids (saliva and urine)
9304638
Exosomal proteins of colorectal cancer cells
9304638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
Radial_spoke_3
FGGY_C
FtsA
Motif
Other DBs
NCBI-GeneID:
9304638
NCBI-ProteinID:
XP_020874351
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MARSFGANGTVVLAIIFFGCLFAFSTAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKL
VPYQIVNKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNALETYVYNMKNQVSDKDKLADKLEGDEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGGESATEE
EDESHDEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcgttcggagcaaacggcactgttgtgttggcgatcatcttcttcggatgt
ttatttgcgttttccactgcaaaagaagaggctacgaagttgggaacagttatagggata
gatcttggtaccacttactcttgtgttggtgtttacaagaatggccatgttgaaattata
gccaatgaccaaggaaaccgtattacaccttcatgggttgcttttactgattctgagaga
ctcattggtgaggctgctaagaatcaggctgctgttaatccagagaggactatcttcgac
gtcaagagattgattggccgaaaatttgaggacaaggaggttcaaaaggacaggaaactt
gtaccttaccagattgtgaacaaggatggtaagccatacattcaagtcaagatcaaggat
ggtgagactaaggttttcagtcctgaggaggtcagtgccatgattctgactaagatgaag
gagacagccgaagcttaccttggaaagaaaatcaaggacgctgttgtcactgttccagct
tacttcaacgatgcccaaaggcaagctaccaaggatgccggtgtgattgctgggctcaat
gttgctagaatcatcaacgaacctactgctgctgctattgcctacggtcttgacaagaag
ggtggtgagaagaacatccttgtctttgatcttggtggtggtacttttgatgtcagtgtc
ttgaccattgataacggagtgttcgaggttctctccaccaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggagtacttcatcaagttgattaagaagaagcac
cagaaggacatcagcaaggacaacaaggctcttggtaagctccgaagggaatgtgagagg
gcaaagagagctctcagtagtcagcaccaagtccgtgtagagattgagtctctctttgat
ggtgttgatttatctgagccactcaccagagctcgtttcgaggagctgaacaatgatttg
ttcaggaagaccatgggacctgtgaagaaggccatggatgatgctggtctacagaagagc
cagattgatgagattgtccttgttggtggaagcaccaggatcccaaaggttcagcaactg
ttgaaggacttctttgaaggtaaagagccaaacaagggtgtgaaccccgatgaggctgtt
gcttatggtgctgctgttcagggtggtattttgagcggagaaggcggtgatgagaccaaa
gatatccttcttcttgatgttgcgccactcactttgggaatcgagactgtaggaggagtg
atgacaaagctgatcccgagaaacacggttattccaaccaagaaatctcaggttttcaca
acgtaccaagaccagcagaccactgtctccattcaagtctttgaaggtgaacgaagtctc
acaaaggactgcaggctgctcgggaaattcgacctcaccggaattccaccagccccaaga
ggaacccctcaaatcgaggtcacattcgaagtggacgccaatggtatccttaatgtgaaa
gcagaggacaaggcgagtggaaaatcagagaagattacaatcacaaacgagaagggtcgt
ctgagccaagaagagattgaccggatggtaaaggaggcagaggagtttgcagaggaagac
aagaaggtgaaggagaggatcgacgccaggaatgccttggagacatacgtgtacaacatg
aagaaccaagtgagcgacaaggacaagcttgcagacaaattggaaggagatgaaaaggag
aagattgaagcagcaaccaaagaggccttggagtggctcgacgagaaccaaaactcagag
aaagaagagtacgacgagaagctcaaggaggtagaagcagtgtgtaacccaatcatcacg
gcagtttaccagagatctggcggagcaccaggtgcaggaggagaatcagcgactgaggaa
gaagatgagtctcacgatgagctctag
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integrated database retrieval system
