KEGG   Arabidopsis lyrata (lyrate rockcress): 9304734
Entry
9304734           CDS       T01578                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9304734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9304734
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     9304734
SSDB
Motif
Pfam: HD HD_assoc_2 HDOD
Other DBs
NCBI-GeneID: 9304734
NCBI-ProteinID: XP_020873173
LinkDB
Position
Unknown
AA seq 473 aa
MGAYCNEDLSSLPVFSAGAPANELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELK
QLGVTNMVYPGAVHSRFEHSLGVYWLAGETVQRLKSFQGMELGIDNHDLQTVRLAGLLHD
IGHGPFSHMFEREFLPKVISGCRWSHESMSVNMIDHIVDTHHIDIDAQMLKRVKDMILAS
TEFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYLVRDSRACGLGCNFQFQRLTETMRVMD
NEICYRAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANDFLGISSFISDP
SEYWKLDDTILKTIEIAPDPELAEAKELILRVRRRQLYQFCNEYAVPKDKIDHFKAVTAQ
DIICSQKHTSLTLKEDDIAVTNVKIDLARGRENPLECINFFEDYDSAEKFGIPEDRVSHL
LPTTYQDMIVRVYAKKPELVEAVSEAFENFQMRTYGVKTQVHATPEKKKRRVM
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgaagacctaagtagtttaccggtgttctccgccggcgctccg
gcgaacgagctccggttcagcaaacatgtctacgataacgttcatggaaacatctatctc
gatcctctttgtttgaaattcattgacactgagcagtttcaaaggcttcgtgaactaaag
caacttggagtgacaaacatggtatatcctggagctgtacattctagatttgagcactct
ttaggcgtgtattggcttgcaggcgaaactgttcagaggctaaaaagtttccagggaatg
gagcttggtattgacaatcatgatcttcagactgtgagacttgctggacttctccatgac
attggccatgggcctttcagtcatatgttcgagcgtgagttcctcccaaaggtcataagt
ggctgtcgttggtctcatgagtcaatgtctgttaacatgattgaccatatagttgataca
catcacatcgatattgatgcacaaatgctgaaaagagtaaaggacatgatactagctagt
actgaattttctcagctgaaaagcaacgcagagaaacgtttcttgtatgacattgttgct
aatggtcgaaatgggattgatgtggacaagtttgactatcttgtccgtgattctcgagct
tgtggtctgggatgcaattttcagttccaaagactgacagagacaatgagagtcatggac
aatgaaatctgctaccgcgctaaggagtatcgtaatgtccacaagctatttgcgactcga
gctgatctttatcgaactgtctacacgcatccaaaagtaaaggcgatagagcttatgata
gtagatgccatggtcaaagctaacgatttcttggggatttcttctttcattagtgaccca
tctgaatactggaagttagatgacacaatcctcaaaaccatcgaaatagctccagatcca
gaacttgcagaagctaaagagctgatactccgtgttcgcagaaggcagttgtaccaattc
tgtaacgagtatgcggttccaaaggacaagatcgatcatttcaaagccgtcactgctcag
gatatcatctgttctcagaagcacacaagcttgacactaaaagaagatgatatcgctgtt
acgaacgtcaagattgatttagctcgtgggagagagaatcctcttgaatgcatcaacttc
tttgaggattatgatagtgcagagaagtttggtatacctgaggaccgagtcagtcacttg
ttaccaacaacatatcaagacatgatagtgagagtttatgccaaaaaaccagaattggta
gaagcagtttctgaggcgtttgaaaacttccaaatgagaacgtatggggtcaaaactcaa
gtacacgcaacacctgagaaaaagaaaaggcgtgtgatgtaa

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