Arabidopsis lyrata (lyrate rockcress): 9304798
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Entry
9304798 CDS
T01578
Name
(RefSeq) solanesyl diphosphate synthase 2, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900
Terpenoid backbone biosynthesis
aly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9304798
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aly01006
]
9304798
Enzymes [BR:
aly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
9304798
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
9304798
Prenyltransferases [BR:
aly01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
9304798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Urm1
Motif
Other DBs
NCBI-GeneID:
9304798
NCBI-ProteinID:
XP_002868726
UniProt:
D7MJN3
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MMMSCRNIDLGTSVLDHSCSSSSTSRRFLFGNCSKNVCMIGGRSYAGNLVFLRRDFGTCR
AVPAKSKENSLVNGIGQDKTVMLNLRQESRKPISLENLFEVVADDLQRLNDNLLSIVGAE
NPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLI
HDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLQVIKLISQVIKDF
ASGEIKQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKN
LGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESEFCEPG
SLEEAIEIVRNRGGIKKAQELAKEKGELALKNLNCLPRSGFRSALEDMVMFNLERID
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcatgtcggaatatagacttgggtacgagtgttcttgatcattcttgtagc
tcttcttcaacaagtcgtcgattcttgtttgggaattgttccaagaatgtttgtatgatt
ggtggcagaagctatgctggaaatttggtctttctccggcgagatttcggtacttgcaga
gcggttccggctaaatccaaggagaattctctggtcaatggtattggtcaagataaaaca
gtgatgctcaatctgaggcaagagtcacgaaagccgatatctttggaaaatctgtttgag
gtagtagctgatgatttgcagaggttgaacgacaatcttttatcgattgttggtgcagaa
aatccggttttgatatctgcggctgagcaaatcttcagtgctggtggcaagaggatgaga
ccgggtttggtattccttgtatcacgagccactgcggaattagctggcttaaaggaactt
acagtagaacatcggcgtttaggtgagatcattgagatgattcacaccgcaagtttgata
cacgatgatgtgttagacgaaagtgatatgcgaagaggaaaagaaacggttcacgagctt
ttcggaacaagagtagctgtattagctggagatttcatgtttgctcaagcatcatggtac
ttagcaaatctcgaaaacctccaagtcattaagctcataagtcaggtaatcaaagatttt
gcaagcggtgagataaagcaagcatcaagtttattcgattgtgatgtcgagcttgatgac
tacttgctaaagagttactacaagacagcttcattagtagctgcaagcaccaaaggagct
gcaattttcagtaaagtcgaaagcgaggtcgcagagcaaatgtatcagttcggaaagaat
ctcggtttatcttttcaagtagttgatgacattctggacttcactcaatccacagagcag
ttagggaaacctgcagctaatgacttagccaaaggtaacataacagcgccagtgatcttc
gcactagagaatgagccgaggctaagagagatcattgagtctgagttttgtgagcctgga
tcgcttgaagaagcgattgaaatagttagaaatcgcggtgggatcaagaaagctcaagaa
ttggctaaggagaaaggtgagcttgcgttaaagaatctgaattgtcttccgagaagtggt
ttcagatcggctcttgaggatatggtgatgtttaatcttgaaaggattgattag
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