Arabidopsis lyrata (lyrate rockcress): 9304898
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Entry
9304898 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9304898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9304898
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9304898
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
9304898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
DUF4729
SCAMP
zf-RING_UBOX
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
9304898
NCBI-ProteinID:
XP_002868826
UniProt:
D7MK84
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MECAASDANDLSSIHLHKRQQTKDETRSAMLDLDFLDCPICIEPFTVPIFQCDNGHLACA
SCCPKLSNKCPTCTLPVGHIRSRAMESVLESIFIPCPNAKLGCTTNVSYGKQSIHEKECS
FSLLCSCPLQDCNYTSSYSNMYRHFISDHQNKYMLFCCDTFANVRMNISDKILIRVEYEV
SLVFAVQCFKEPCGVYVTVSCIAPSFQEVGKFSYHLSYTVDGHTMTYESPKVKKVLKVSY
QIPEESFMLIPHSLLRGEILDMKLCIKKLRQE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgccgcaagcgatgcaaatgatttgagcagcattcacttgcacaagaggcaa
caaacaaaggatgaaacacgatcggcaatgctggatcttgattttcttgattgccctatt
tgcatcgagccgttcactgttcctatcttccagtgtgataatggacatttagcttgcgct
tcttgctgtcccaaactgagtaataagtgccctacatgtactttgcctgttggtcacatt
cgcagcagagcaatggagagtgttcttgaatctatctttatcccatgcccgaacgccaag
ttaggttgcaccacgaatgtctcttatgggaaacagtcaatacatgagaaggaatgtagc
ttctctctcctctgctcatgccctctacaagactgcaattacactagctcatactctaac
atgtaccgtcactttattagtgaccaccagaacaaatatatgttgttctgttgtgacact
ttcgctaatgttcggatgaatataagcgataagatattgattagagttgaatatgaggta
agcctagtgtttgcagtgcaatgttttaaggagccgtgtggtgtctatgtaactgtaagc
tgcattgcaccgtcttttcaagaagtaggaaaattctcataccatctctcctacactgtg
gatgggcacactatgacttacgaatcaccgaaagtgaagaaagttcttaaagtgagctac
caaatacctgaagagagtttcatgttgatccctcacagtttattgcgtggtgaaattttg
gatatgaagctttgcatcaagaagttgaggcaagagtaa
DBGET
integrated database retrieval system
