Arabidopsis lyrata (lyrate rockcress): 9304974
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Entry
9304974 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9304974
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9304974
04121 Ubiquitin system [BR:
aly04121
]
9304974
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9304974
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9304974
Membrane trafficking [BR:
aly04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
9304974
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9304974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
9304974
NCBI-ProteinID:
XP_002866845
UniProt:
D7M8I9
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MVSRRGSSDTKAIVCIFTDRIRFSNNWVSHLSFAGLLGAAGFVFAQQHGLFPNLNNLKLF
SGKEKDAGDDSVLVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARDSVAGELEE
QLPLTYALSALLQELCTVGSRRSVSSPRKVMVALTDYATNFNLTSQQDAAEALLHLISSL
QEEIVVCYRPSQSCNLSDILFSRNLRMLAPSEGLLGLMELKRWHKHLRGPFDGILGSTLM
CRTCSSQISLEFQFFHTLPLSPLLHNGGYNIMFGCTLENCLNKFLNAEKVENYFCYRCWH
GAALKYLSVIGAAEIDIEMVRSCGGEDQCDCKTSHHLQRMPWSNSYSHILKQLIIARLPK
LLCIQVQRASFNMFEEFKLSGHIAFPLVLDLSLFTPTSIGLNIEERIEMSSEYQKPEASR
KHGMYRLVTVVEHFGRTGSGHYTVYRSVRVPSQEEEEDCEELCWFSISDSEVCRVSESDV
LGAEASLLFYERL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcgtagaggttcttccgacacaaaggcgattgtgtgtatcttcacagataga
attaggttctccaacaactgggtttcgcatttgtcttttgctggtctacttggtgctgct
ggttttgtatttgcccaacaacacggtctattccccaacttaaacaacctaaaactcttc
tccggtaaagaaaaagacgccggagacgattctgttctcgtaccgggccttcaaaatctc
gggaataactgtttcctcaacgtcatcctccaggctctcgctagctgcaaagattttcgg
agttttcttcaatgggttttagaggatgcgagagattccgtagcaggagaactagaggaa
cagcttcctcttacttatgctttgtctgctttactacaagagctctgcactgttggaagt
agacgatctgtgtctagccctcgtaaagttatggtggcattgacagattatgccacaaat
ttcaatttgacaagccaacaggatgcagcagaagcccttcttcatcttatttcttctttg
caagaagagattgtagtctgttatcgtcctagccaaagttgtaatctttcggatatactt
ttctctcgcaacttgagaatgcttgcgcctagtgaaggcctccttggtttgatggagctc
aagagatggcataaacatttgcgtggaccatttgatgggattcttggtagtacgttgatg
tgccgaacttgttcgtctcagatttcgttggagtttcagttttttcatactctgcctctt
tctcctttactccataacggtggttacaacattatgtttggatgcactttggagaattgc
ttgaacaagtttctcaatgctgagaaagtcgaaaactacttctgctatagatgctggcat
ggtgctgcactgaaatatttatcggtgataggagcagctgagatagatattgaaatggtc
aggagctgtggcggagaggaccaatgtgactgtaaaacttctcatcatcttcaaagaatg
ccttggtcaaacagctattcccatatattgaagcagttaatcatcgcccgtttaccaaag
ctcctatgcattcaagtgcaacgtgcttcatttaacatgtttgaagaattcaaattatcg
ggacatatcgcatttccacttgtcttagacctctccttgttcacaccaacttcaataggc
ttaaacatagaagaaaggattgagatgtcttcagagtaccaaaagccagaagcatcaaga
aagcatggcatgtacaggcttgtgacggtggtggaacattttggtagaacgggaagcggg
cattacactgtttatagaagtgtgagagtgccatcacaagaggaagaagaagattgtgag
gaattgtgctggtttagtatatctgattcagaagtttgcagagtttcagagagtgatgtt
cttggtgctgaagctagcttgctcttctatgaaaggctgtga
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integrated database retrieval system
