Arabidopsis lyrata (lyrate rockcress): 9305223
Help
Entry
9305223 CDS
T01578
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI1 isoform X2
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9305223
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
9305223
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
9305223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
9305223
NCBI-ProteinID:
XP_002869152
UniProt:
D7MF22
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MDDYFSAEEEDCYYSSDQESLDGIDNEESELHPVSSKKSNTQVITQESLLAAQREDLLRV
MDLLSIKEHHARTLLIHYQWDVEKLFAVFVEKGKDSLFSGAGVTVFDCQYGNSSFSRSTQ
MSCDVCIEDVPGDQMTRMDCGHCYCNNCWTEHFTVQINEGQSKRIRCMAHQCNAICDEDI
VRNLVSKKRPDLAEKFDRFLLESYIEDNKMVKWCPSTPHCGNAIRAEDDKLCEVECSCGL
QFCFSCLCQAHSPCSCLMWELWRKKCRDESETINWITVHTKLCPKCYKPVEKNGGCNLVR
CICGQCFCWLCGGATGSDHTYRSIAGHSCGRYQDDKEKQMERAKRDLDRYTHYHHRYKAH
TDSSKLEDKLRDTIHEKVSKSEKRELKLKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMFG
EELFKDEMTPEEREMKKNLFEDQQQQLESNVEKLSQFLEEPFDEFSDDKVMAIRIQIINL
SVAVDTLCKKMYECIENDLLGSLQLGIHNISPYRSKGIEQAAQFYASWNSKGADKFLPLD
SGTSGVTSRPEQGSGSRSSEDTICSSSQKRPKKEGSFLNNKATLLDLNLPADFIDPN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatgattattttagcgccgaggaagaggattgctattactcctccgatcaagagtct
ttggacggaattgataatgaagagtctgaattgcatcctgtgtcgtccaaaaaatcaaac
actcaggtcatcactcaggaatcgcttctagcagcacagagagaagatttgctaagggtg
atggatttgctatcgattaaggagcaccatgcgcggactcttcttattcattaccagtgg
gatgtggagaagttgtttgctgtgtttgttgagaaaggaaaagatagcttgttttctgga
gctggtgtcaccgtgttcgactgtcaatatggcaactcttccttttctcgctctacgcag
atgagttgtgatgtctgcatagaggatgtacctggtgatcagatgacaagaatggactgt
ggccattgctattgcaataattgttggacggagcattttactgtgcagataaatgaaggt
cagagcaaaaggattagatgcatggctcaccaatgcaatgctatttgtgatgaagatatt
gtcaggaatcttgtcagtaaaaagcgtcctgatctagctgagaagtttgatcgtttcctt
cttgagtcgtacatcgaagacaacaaaatggtcaagtggtgtcctagcactccccattgt
gggaatgctatacgagcggaggatgacaagttgtgcgaagttgaatgttcctgtggtctt
cagttctgtttcagttgtctgtgtcaagcccactccccttgctcttgtttgatgtgggag
ttatggagaaagaagtgtcgagatgagtctgagactattaattggataaccgtccacaca
aagctgtgtcccaaatgttataaacccgtggaaaagaatggtggatgcaatctcgtaagg
tgtatttgtgggcagtgtttctgttggctatgtggtggagctactggaagtgatcacact
tataggagtattgctggtcacagttgtggtcggtaccaagatgacaaagagaagcagatg
gaaagagcgaagagggatttagacaggtatacgcattatcatcaccgatacaaagcgcat
acggattcatcaaagctagaagataaacttagggacactatccatgagaaagtgtcgaaa
tcagaaaagagggagttgaagcttaaagacttcagttgggtcaccaatggactcgaccgg
ttattcagatcaaggcgggttctttcatattcgtatgcttttgcatattacatgtttggg
gaagagctgttcaaagatgagatgacccctgaggagagagagatgaagaagaatttgttt
gaggatcagcagcaacaacttgaaagtaatgtggagaaactttcccagttccttgaggag
ccctttgatgaatttagtgatgataaagttatggcgataaggattcaaatcatcaatttg
tctgttgcggtcgatacgctctgcaagaaaatgtacgagtgcattgagaatgacttactc
ggatctctccaacttggcatccacaacatctcaccttacagatcaaagggaattgaacaa
gcagctcagttttatgcatcctggaattccaaaggtgctgacaaattcctacctttggat
agtggtacaagcggagtgacatcgaggcctgagcaaggttcaggatcaaggagctcggaa
gacaccatttgctcatcttcacagaaacgtcccaaaaaagaaggaagtttcttaaacaac
aaagccactttattggatttgaacttgccagctgatttcatcgacccgaactga
DBGET
integrated database retrieval system
