Arabidopsis lyrata (lyrate rockcress): 9305337
Help
Entry
9305337 CDS
T01578
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9305337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9305337
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
9305337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
9305337
NCBI-ProteinID:
XP_002867236
UniProt:
D7MA32
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MIRGGRNNITSAPAFSKDAKKLLLCTANTVSVYRVATGLKITSLEDHTAPVTTVIVDMAS
NETHSYCWTSSLDGKIRIWEFSEPKLLKTFDTHLPIHSLVMIPSHVSHSVIAYVSVEDYS
SVSSDLFGQIRRYDLTEEPLPSGDILKEMEEPKPIVLSPLGDFFGVCHSCNIHIWNASLG
ASEHLKPKETTLHHTELITVFAFHPNQRILAAGDVKGRVLIWKDIGNGELTSVKSEGDPE
SCTAFNWHSAEVTVLNFSSDGALLYSGVKEGVFVVWELDTRKKKLLPKIGSPLLYFISSS
DPTLSSVICADNQIHLSKMPSMEILRTISGIKPRRSERHGFICYVKTRDICLTRTVSIDR
SSGIAAFCAENHRVQLYNLLSDHEISEVQICERNHHPDGDEVRVLVTAVALSRNGSVMTT
ADARFAASNFSEGLVSLKFWVFVPDSKTFSLSTVINQPHREAAITAIALNPARSMAVSIS
SAGDFKIWVCNSDKNLTPEDSNWICHGDGSYKRTPITAAVFSGDGSCLAIAAKTVITIWH
PLKNELLYVVGKANATIMELSFTGGGFLIAASHGSTPHLSVWDLMTFCLSWSYRLYIEAI
ATEVGSPYFAVLTWLPESDRLVKSNGQMFCGKDGAILLFDGSGPKPVAIWTVMKARGGTL
SFVEDGKKSQPLLAYVNRSHEYVLFDPYGDEKLETSAIDYEVFLAAISKKTKRSRKKALM
SEKPWETNFCGSTLNFPPFPDVCSAFFSSRMQKKVCERAEREPESHSS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcggcggaagaaacaacataacttccgctccggcgttttcgaaagacgcaaag
aagcttcttctatgcacagccaacaccgtctctgtttaccgcgtcgccactggcttaaag
attacttcactcgaggatcatacagcacctgtgacgactgtgattgttgatatggcgtcc
aacgagacccacagttactgttggacttcgtcgctcgatgggaaaattcggatttgggag
ttctcggagccgaagcttttgaagacatttgatacccaccttccaattcactctctggtg
atgattccatctcacgtgtcacactccgtgattgcttatgtttcggttgaggactattca
agtgtgtccagtgatttgtttggacaaatccggagatatgatctcactgaagagcctctt
cctagtggagacattttgaaagagatggaagaaccaaaacctattgttctaagtccctta
ggagattttttcggcgtctgtcatagttgcaatatacatatatggaatgcctctcttggg
gcatcagagcatctcaagccaaaggagacgacattacatcacacagagttgattactgtt
tttgctttccatcccaatcagagaatattagcagccggtgatgtaaaaggaagagtgtta
atttggaaggatattggtaatggagaacttacttcagtgaaaagtgaaggtgatcctgaa
tcttgcactgcattcaactggcactccgctgaagtaaccgtccttaatttctcttcagat
ggagcactgttgtattctggggtaaaggaaggtgtttttgttgtttgggagctagataca
aggaaaaagaaacttttgccaaagattggatccccgttgttgtatttcatctcctcttca
gatccaactctttcttctgtgatttgtgcagataatcagattcatctttcaaaaatgcct
tccatggagatactgagaacgatatctggaatcaagcctcggagatcagagcgtcacggg
tttatatgctacgttaaaacgagggatatatgcctcaccagaactgtgtccattgatcgt
tcttccggtatagctgctttctgtgcagagaatcatcgtgttcaactctacaacctttta
agtgaccatgaaatttcagaggttcaaatttgcgagagaaatcatcatccagacggtgat
gaagtccgggttctcgtgactgcggttgctctctctcggaatggctcagtgatgactaca
gctgatgccagatttgctgcaagcaatttcagtgaaggcttagtttctctcaagttttgg
gtgtttgtaccggacagcaaaactttcagcttatcgacagtcataaatcaacctcacagg
gaagctgctatcacagccattgcccttaaccccgcccgttccatggctgttagtatatct
tctgctggggacttcaagatttgggtttgcaatagcgacaagaatctgacacctgaggat
tcaaactggatatgtcatggagatggctcttacaagagaacgccaataacagctgctgtt
ttttccggggatggttcttgtctggctattgcggctaaaacagttattacgatctggcac
ccgttaaagaacgaactcttgtatgtagttggaaaggcaaatgcgacaattatggaactc
tcattcactggaggaggcttccttattgctgcatcccatggttccacaccgcacttatct
gtctgggatttgatgacgttctgcttatcatggtcttatagattatacatagaagccatt
gccactgaagtgggctcgccatactttgcagtattaacatggcttccagaatctgatagg
ttggtaaaatctaacggacaaatgttctgcgggaaagatggtgctatcctcttgtttgat
gggtcaggccctaaaccagtagctatttggactgtaatgaaggccaggggaggaacgctt
tcatttgtggaagatggtaaaaagtctcagccacttctcgcatatgtaaacaggagccat
gaatatgttctttttgatccttatggcgatgaaaaacttgagactagcgccatagattat
gaagtttttcttgcagcaataagcaagaagacgaagagatctaggaagaaagcattgatg
tcagagaaaccttgggaaacaaacttttgtggatcaacgctcaatttcccgcctttcccc
gacgtgtgctctgctttcttcagttcccggatgcagaaaaaggtgtgtgagagagcagag
agagaacctgaaagtcatagctcttga
DBGET
integrated database retrieval system