KEGG   Arabidopsis lyrata (lyrate rockcress): 9305337
Entry
9305337           CDS       T01578                                 
Name
(RefSeq) WD repeat-containing protein 75
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    9305337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9305337
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    9305337
SSDB
Motif
Pfam: Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_IFT140_1st Beta-prop_EML WDR55 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 9305337
NCBI-ProteinID: XP_002867236
UniProt: D7MA32
LinkDB
Position
Unknown
AA seq 768 aa
MIRGGRNNITSAPAFSKDAKKLLLCTANTVSVYRVATGLKITSLEDHTAPVTTVIVDMAS
NETHSYCWTSSLDGKIRIWEFSEPKLLKTFDTHLPIHSLVMIPSHVSHSVIAYVSVEDYS
SVSSDLFGQIRRYDLTEEPLPSGDILKEMEEPKPIVLSPLGDFFGVCHSCNIHIWNASLG
ASEHLKPKETTLHHTELITVFAFHPNQRILAAGDVKGRVLIWKDIGNGELTSVKSEGDPE
SCTAFNWHSAEVTVLNFSSDGALLYSGVKEGVFVVWELDTRKKKLLPKIGSPLLYFISSS
DPTLSSVICADNQIHLSKMPSMEILRTISGIKPRRSERHGFICYVKTRDICLTRTVSIDR
SSGIAAFCAENHRVQLYNLLSDHEISEVQICERNHHPDGDEVRVLVTAVALSRNGSVMTT
ADARFAASNFSEGLVSLKFWVFVPDSKTFSLSTVINQPHREAAITAIALNPARSMAVSIS
SAGDFKIWVCNSDKNLTPEDSNWICHGDGSYKRTPITAAVFSGDGSCLAIAAKTVITIWH
PLKNELLYVVGKANATIMELSFTGGGFLIAASHGSTPHLSVWDLMTFCLSWSYRLYIEAI
ATEVGSPYFAVLTWLPESDRLVKSNGQMFCGKDGAILLFDGSGPKPVAIWTVMKARGGTL
SFVEDGKKSQPLLAYVNRSHEYVLFDPYGDEKLETSAIDYEVFLAAISKKTKRSRKKALM
SEKPWETNFCGSTLNFPPFPDVCSAFFSSRMQKKVCERAEREPESHSS
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgattcgcggcggaagaaacaacataacttccgctccggcgttttcgaaagacgcaaag
aagcttcttctatgcacagccaacaccgtctctgtttaccgcgtcgccactggcttaaag
attacttcactcgaggatcatacagcacctgtgacgactgtgattgttgatatggcgtcc
aacgagacccacagttactgttggacttcgtcgctcgatgggaaaattcggatttgggag
ttctcggagccgaagcttttgaagacatttgatacccaccttccaattcactctctggtg
atgattccatctcacgtgtcacactccgtgattgcttatgtttcggttgaggactattca
agtgtgtccagtgatttgtttggacaaatccggagatatgatctcactgaagagcctctt
cctagtggagacattttgaaagagatggaagaaccaaaacctattgttctaagtccctta
ggagattttttcggcgtctgtcatagttgcaatatacatatatggaatgcctctcttggg
gcatcagagcatctcaagccaaaggagacgacattacatcacacagagttgattactgtt
tttgctttccatcccaatcagagaatattagcagccggtgatgtaaaaggaagagtgtta
atttggaaggatattggtaatggagaacttacttcagtgaaaagtgaaggtgatcctgaa
tcttgcactgcattcaactggcactccgctgaagtaaccgtccttaatttctcttcagat
ggagcactgttgtattctggggtaaaggaaggtgtttttgttgtttgggagctagataca
aggaaaaagaaacttttgccaaagattggatccccgttgttgtatttcatctcctcttca
gatccaactctttcttctgtgatttgtgcagataatcagattcatctttcaaaaatgcct
tccatggagatactgagaacgatatctggaatcaagcctcggagatcagagcgtcacggg
tttatatgctacgttaaaacgagggatatatgcctcaccagaactgtgtccattgatcgt
tcttccggtatagctgctttctgtgcagagaatcatcgtgttcaactctacaacctttta
agtgaccatgaaatttcagaggttcaaatttgcgagagaaatcatcatccagacggtgat
gaagtccgggttctcgtgactgcggttgctctctctcggaatggctcagtgatgactaca
gctgatgccagatttgctgcaagcaatttcagtgaaggcttagtttctctcaagttttgg
gtgtttgtaccggacagcaaaactttcagcttatcgacagtcataaatcaacctcacagg
gaagctgctatcacagccattgcccttaaccccgcccgttccatggctgttagtatatct
tctgctggggacttcaagatttgggtttgcaatagcgacaagaatctgacacctgaggat
tcaaactggatatgtcatggagatggctcttacaagagaacgccaataacagctgctgtt
ttttccggggatggttcttgtctggctattgcggctaaaacagttattacgatctggcac
ccgttaaagaacgaactcttgtatgtagttggaaaggcaaatgcgacaattatggaactc
tcattcactggaggaggcttccttattgctgcatcccatggttccacaccgcacttatct
gtctgggatttgatgacgttctgcttatcatggtcttatagattatacatagaagccatt
gccactgaagtgggctcgccatactttgcagtattaacatggcttccagaatctgatagg
ttggtaaaatctaacggacaaatgttctgcgggaaagatggtgctatcctcttgtttgat
gggtcaggccctaaaccagtagctatttggactgtaatgaaggccaggggaggaacgctt
tcatttgtggaagatggtaaaaagtctcagccacttctcgcatatgtaaacaggagccat
gaatatgttctttttgatccttatggcgatgaaaaacttgagactagcgccatagattat
gaagtttttcttgcagcaataagcaagaagacgaagagatctaggaagaaagcattgatg
tcagagaaaccttgggaaacaaacttttgtggatcaacgctcaatttcccgcctttcccc
gacgtgtgctctgctttcttcagttcccggatgcagaaaaaggtgtgtgagagagcagag
agagaacctgaaagtcatagctcttga

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