Arabidopsis lyrata (lyrate rockcress): 9305436
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Entry
9305436 CDS
T01578
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9305436
03012 Translation factors [BR:
aly03012
]
9305436
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
9305436
mRNA cycle factors
Stress granule specific factors
9305436
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
eIF-4
9305436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
9305436
NCBI-ProteinID:
XP_002867334
UniProt:
D7MBT3
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MQQGDSVLSLRPGGGRGGSRLFAPRFTLSSSSDLTNGADAPSFAVKRGDSRFEGRELLRF
TREQLLQLREAIQVSDEILKLNQEIASDLFGEEEQSWGRSENKPENQLQNRYSEPDNRDW
HTRAPIPSPSKERSREDQREARDAHTQGSGPPPALVKAEVPWSAKRGTLSEKDQILKTVK
GILNKLTPEKYDLLKGQLIDSGITTADILKGVIQLIFEKAVLEPTFCQMYALLCFDINGK
LPSFPSEEAGGKEITFKRVLLNNCQEAFEGAGKLKEEVRLMTDPEQEMERRDKERMAKLR
TLGNIRLIGELLKQKMVPEKIVHHIVQELLGQDNKACPGEEDVEALCQFFITIGKQLDES
PRSRGINDMYFQRLNELAMNPMLAPRMRFMVRNVIDLRSNKWVPRREEMKAKKITEIHSE
AEKNLGLRPGAMANMRNNNNRGGADAGAAEILGSGNFLGRSGTGGMMPGMPGARKMPGMP
VTDDDGWEMARSCSMPRGNRQNPHPVGRVQSPVIIDKSLSLNSRLLPQGSGGLMNGRPSA
LVQGNGSELPKPVPSPTRPTVETPKPQPQPQEVAPPTATSLNTGELSRKTNSLLEEYFNV
RLLDEALQCVEELKTPSYHPELVKEAISLGLEKNPPCVEPVAKLLEHLVSKNVLTPKDLG
NGCLLYGSMLDDIGIDLPKAPNNFGEIIGSLVMAKASDFELVKEILMKMEDEWFKKAVLK
AVIGSVSESLLATQEAEVEVCRSLV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaggtgactcagtgttgagcttgaggcctggaggtggtcgtggaggaagcaga
ctctttgccccacgctttaccttatcttcttcctctgatcttaccaatggcgcagatgct
ccttcttttgccgttaagagaggagactcgcgatttgagggtcgtgagcttttgcggttc
acccgagaacagctgcttcagcttagagaggctatccaagtctctgatgaaattctgaag
ctcaatcaggaaattgcatctgacctttttggtgaagaagagcagagctggggccgttca
gaaaataagcctgaaaatcaacttcagaatcgttactcagagcctgataatcgtgattgg
cacactcgtgcaccaattccttccccaagtaaagaacggtcaagggaagaccaacgtgaa
gctagagatgcacatactcaaggatctggccctcctcctgccctggtgaaagcagaggtc
ccatggtcagctaaaagaggaactctttcagaaaaggaccaaatcctcaagaccgtgaaa
ggtattctgaacaagctgactcctgaaaagtacgatctcctcaaaggtcaactaattgac
tctgggattactactgctgatatcctaaagggagtgatacagctgatttttgagaaggct
gtactagagcccacattttgtcagatgtatgcccttttgtgttttgatatcaatggaaag
ctcccttcgttcccatcagaggaagccggtgggaaagaaataacattcaaaagagtgctt
ttgaacaattgccaagaagcatttgaaggcgctggcaaattgaaggaagaagtcagactg
atgactgatccagagcaagaaatggaacgcagggacaaggaaagaatggcgaagcttcga
acattaggaaatatccgtttgattggtgaacttctgaagcagaagatggtgcccgagaag
atagttcatcacatcgtccaagagcttttaggacaggacaataaagcttgcccaggggaa
gaagatgtagaggctctctgtcaatttttcatcaccatcgggaaacaactagatgagagt
ccaagatcacggggtataaacgacatgtacttccaacgtttgaatgaactagcaatgaac
ccgatgcttgctccacgcatgagatttatggtccgtaatgttattgatctgcgctctaac
aaatgggtaccaaggcgtgaggagatgaaagcgaagaaaatcactgagattcattccgag
gcagaaaagaatcttgggttacgccctggtgccatggcgaatatgagaaataataacaat
cgtggtggtgctgatgctggtgcagctgaaattcttggctctggaaacttcctgggacgt
tcaggtactggaggaatgatgcctggaatgccaggagctaggaagatgccgggaatgcct
gtaacagatgatgatggttgggagatggcacggtcctgttccatgcccagaggcaatagg
cagaatccacatcccgttgggcgtgttcagtctccggttatcattgacaagtcactgtcg
cttaattcaaggctgctacctcagggaagtggtggtcttatgaacggtagaccaagtgcc
cttgtgcaaggtaatggttccgaactgcctaaacctgttccttccccgaccagaccaact
gtggagacgccaaagccacaaccacagccacaggaggtggctcctcctacagctactagc
ttgaacacaggagaactcagtagaaagactaactcgcttttggaggaatatttcaatgtc
cgtctattggatgaggcattacaatgcgtagaagaactgaaaaccccgtcttaccatccc
gagctcgtcaaggaagctatctccctcggcttggagaagaaccctccatgtgttgaacca
gtggcgaaactcttggaacatctggtctctaagaatgttctaactcctaaagacttaggg
aatggttgtctgctctatgggtctatgctcgatgacattgggattgatctgccaaaagcg
ccaaacaactttggggagatcattggtagtttggttatggccaaagcatcggattttgag
ctggttaaagagattctaatgaaaatggaggacgagtggttcaagaaagcagttttgaaa
gctgtgatagggagtgttagtgagtctctactggctacgcaagaagccgaggttgaggtt
tgccgtagtttggtgtag
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