Arabidopsis lyrata (lyrate rockcress): 9305587
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Entry
9305587 CDS
T01578
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9305587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9305587
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
9305587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
9305587
NCBI-ProteinID:
XP_002867461
UniProt:
D7MDM0
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MADVVQYRLERMVDELDDLERRGIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY
EVKLDELRQLRRKAVAYESKKRKKKSVSDYAGVARIVEIYRLATMRYKGDINLWFRYLEF
CKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCSNSED
LWVEYLRMELTYLNKLKARRVALGESKGSLVRDTKSVEDEKWKDENKELFMSLDEKEGNE
KEEDGEEDSNVEDAEDVTEKVDVFREKGSNVLQTIYSGAVEALPSSFDLRKRFLEILEAT
DLAHSDEIRNTILSDLKRDFCKEPEYWNWLARHEMSGYISKETGLEFSNLQMQKAIQVFE
EGLQTVTSSSMFKIYIKFLMEAIAQSNGDDDEISPSSNPIGDYISHIINVYQKADETGCL
TEELADEYVSLYLKLGKTHEAQKLAEKLCSGKFAGSAKLWLSRVSIEIRSLSGNSTPSKA
DLQTVFELLSNALTKVPISESESLWLMALKFFAHQRTYLDKLVEMSILLATKSHGSDHVF
SLSSTVVNFVLETKGGHSARKIYKRFLALPGPSLVLYKDCIEIETNLISVGDKDGLSNAR
KLYDSAVASYSQDVELWKNYYLLETKMGTSETANGVYWRARKTLKESADFIV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagttcaataccgcctcgagcggatggttgacgagcttgatgatctagaa
cgaagaggaatcttcactcgtgcagagatagctgagatcgtgaagcagcgccgtaagttc
gagtaccggctaaagcgtccaagccctctcaaagaagatttcatagcctatattgactat
gaggttaagctcgatgagctccgccagctacggaggaaagcggtggcttatgagtctaag
aagagaaagaagaaatcggtttctgattacgccggtgtggctaggattgtggagatttat
agattggcgactatgaggtataaaggggatatcaatttgtggtttaggtatctcgagttt
tgtaaacagaagaggcatggaagaatgaagaaggctttggctcaagcaataaggtttcat
ccaaaagtggctggagtgtggatatatgctgcgtcttgggaatttgatagaaacttgaat
gttactgcagctcgtgctctcatgctgaatgggcttagagtttgttcaaactctgaagac
ttgtgggtggagtatctgcggatggaacttacttacctaaataagctgaaagctcgtaga
gttgcccttggtgaaagtaaaggtagtttggtgcgtgacacgaaatccgtcgaggatgag
aaatggaaagatgaaaacaaagagttgtttatgtcgctagatgagaaagaaggaaatgaa
aaggaagaggatggggaggaggactctaatgttgaagatgctgaggatgtgactgagaaa
gttgatgtttttcgggaaaaagggtccaatgttcttcagacaatctatagtggtgctgtt
gaggctcttccatctagttttgacttgaggaagcgttttttggagattctagaggcaact
gacttggcgcattcagatgaaatccgcaatacgattctaagtgacctgaagcgtgatttt
tgcaaggaacctgaatactggaattggcttgcaagacatgaaatgagtggttatattagc
aaagagacaggcctagagttttcgaatcttcaaatgcaaaaggctattcaggtttttgaa
gagggcttgcaaactgttacttcaagttctatgtttaagatttatataaagtttttgatg
gaggctattgcacagtcaaatggtgacgatgatgaaatttctccttcgtctaatcctatt
ggggactacatttcgcatatcataaacgtgtaccaaaaggctgatgaaaccgggtgtttg
actgaggagcttgctgatgaatatgtttctctgtatttgaaactgggaaagactcatgaa
gctcagaagctagcagaaaaactttgctctggaaaatttgctggatcagctaagttgtgg
ctttcaagagtttcgattgaaataagatcactttcagggaactcaactcctagtaaagca
gatttgcagacagtttttgagctcctttcaaatgctttgacgaaagtaccaatctcagaa
tctgagagcttgtggctaatggctcttaaattctttgctcatcagagaacttatttggac
aaacttgtagagatgtccatcctattagcaaccaaaagccatgggagcgaccatgtgttt
tctctttcttccacggtggtgaattttgttcttgaaacaaaagggggccacagtgcgagg
aagatatacaagaggttcttggcgcttcctggtcccagtcttgttctatacaaagattgc
attgaaatagagaccaaccttatatcagtgggtgataaagatggtctcagtaatgcccgg
aagctgtatgattctgctgttgcaagttacagtcaagacgtggagctgtggaagaattac
tacttattggagacaaagatgggaacatcagagacggccaatggagtgtattggcgggcg
agaaagactctgaaggaatcggcggatttcatagtttga
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