Arabidopsis lyrata (lyrate rockcress): 9305673
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Entry
9305673 CDS
T01578
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2 isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9305673
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
9305673
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9305673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
9305673
NCBI-ProteinID:
XP_020873343
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MDALTRNKKKVAHSQTPPLYKRTNSSPLKKAPKSQKPPLKKQRKGISEEKPEVSTDEKEE
EEEENELSDQGDEGSESGSDFFSDDDDDDGEDTEPLAGDFIDGSDHEEGILGSDFGGSKL
ERKSRAIDRKRKKEEKDAEDEFKMNIKEIPDEFQLPTQKELEEEARRPPDLPSLQIRIRE
IVRVLSNFKDLRPKGDKHERTDFVEQLKADLGSYYGYNEFLIGTLIEMFPVVELMELIEA
FEKKRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLIVYDSQVPIGATPEYLA
GFYMLQSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGIIYANEMKVPRLK
SLSANLHRMGVTNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVISKDESVKTSKSA
DDIKKFAHLQKQLILGAIDLVDANSKTGGYIVYSTCSIMIPEVGEPYFFCSTFFFFSWHL
HVLSLFSFVQQIMQNEAVIDYALKNRDVKLVPCGLDFGRPGFSSFIEHRFHPSLEKTRRF
YPHIHNMDGFFVAKLKKMSNAMQPSGNVEPDITMEQAQVSSSDDDDEKVEAIEESEKPPV
TNGQPKRESNTRENKNKQKIPRSKEIDKGKRNKYTKTGSSNVEEPRKQKKKRSQWKNEIA
QAREEKRKAMRENAKEKPKHRG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcttacgcgtaacaagaagaaggtggcacattcacagactccgccactgtat
aagcgtacgaactcgtctccattgaaaaaggcgcctaaatcccagaagcctccattgaag
aagcagaggaaaggtatttcggaggagaagcctgaagtttccacagacgagaaagaagaa
gaagaagaagagaatgaactgtctgatcaaggagatgaagggtctgaatcaggttctgac
tttttctcagatgatgatgatgatgatggtgaggatacagaacctttagctggcgacttt
atcgatggtagcgatcacgaggagggaattttgggttctgactttggtggatccaagctc
gagaggaaatctagagctattgatagaaaacgtaaaaaggaggaaaaagatgcagaagat
gaattcaagatgaacattaaggaaatacctgatgagtttcagctaccaacccaaaaggaa
cttgaagaagaggcacgtaggccaccagatcttcctagcttgcaaatcaggataagagag
attgttagagtgctgtcgaattttaaggatttgaggccaaaaggagacaagcacgagagg
actgattttgttgaacagcttaaagctgatcttggttcttactacggctataatgagttt
cttattggaactttgattgagatgtttcctgttgttgaactcatggaactaatcgaagct
tttgaaaagaaaagacctacatctatccgtactaacactcttaagactcgaagacgggat
ctggctgatgtacttttgaatagaggagttaatcttgacccgttaagcaagtggtcaaaa
gttggacttatcgtttatgattcccaagttccgattggtgcaactcctgaatatttggcg
ggtttttatatgttgcaaagtgctagttccttcttgccagtgatggcccttgctcctcgg
gaaaaagagcgagttgtggacatggctgctgcccctggtggtaaaacaacttatgttgct
gcactaatgaaaaatacaggaataatatatgcaaacgagatgaaagtacctaggcttaag
tcactttctgccaatctgcatcgcatgggggtgacaaataccatagtttgtaactatgat
ggaagagagctacccaaggttttaggtcagaactcggttgatagagtattgctggatgct
ccttgcagtggaactggagtgatatcaaaagatgaatcagttaagacttccaaaagtgct
gatgacataaagaaatttgcccatttgcaaaagcaacttatacttggtgcgattgatttg
gtagacgccaattccaaaaccggtggatatattgtttactcaacatgctcaattatgatt
cccgaggttggtgaaccatactttttctgttccacttttttttttttttcctggcatctt
catgttttgtcactattttcatttgttcaacaaattatgcagaacgaagctgtcatcgat
tatgctctgaaaaacagggatgttaaactcgttccatgtggacttgattttggccgacca
ggatttagcagttttatagaacaccggttccacccttctttagagaagactagacgtttc
tatcctcacatacacaacatggatggattctttgttgctaagctgaagaagatgagcaat
gcaatgcagccttcaggaaatgttgagccagatataacaatggagcaagctcaggtgtcg
tctagtgatgatgatgatgagaaagttgaggccattgaggagtcagagaagccacctgtt
accaatggacaacccaagcgagagagtaacactagagaaaacaagaacaaacaaaaaatt
ccaaggtcaaaggagattgacaaaggcaaaaggaacaaatacacaaaaaccggaagtagt
aatgtggaagaacccaggaagcaaaagaagaagagatcacaatggaagaatgaaattgct
caagctagagaagagaaaagaaaagccatgagagagaatgctaaggagaagccaaaacac
aggggataa
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