Arabidopsis lyrata (lyrate rockcress): 9305706
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Entry
9305706 CDS
T01578
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9305706
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
9305706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
9305706
NCBI-ProteinID:
XP_020873438
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAAVADSVENNDTLNLPEIENLMPAGISVTALPEENSGAFPELNQPDSLAAAETTAPDTN
DFAAERWPGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRI
VLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINL
IGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRK
FLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRDPLFLDR
DARVESRVQPTGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEG
ANIAYIRRRSGATITIKESPHPDQITVEIKGTSSQVQTAEQLIQEFISNHKEPVSVSGGY
ARIDTGYVPAYPPQLSNRQEPLSNSYMGTETVQYRPTAYSQLGGPSTYTPSLNGQTYGSE
YRPASDVGGYSSYNL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcgcagattccgttgagaacaatgatactttaaacctccccgagattgaa
aaccttatgccggcgggaatcagtgtcaccgcattgcctgaagaaaactctggcgccttc
cctgaattgaatcagcccgatagcttagctgctgctgaaactaccgcccctgatacgaac
gatttcgcggcggagaggtggccaggttggcctggggattgcgtgtttcgtatgattgtt
ccggtgagtaaagtcggagctataattggacgcaaaggagactttataaagaagatgtgt
gaagagactcgtgctcgtatcaaagtccttgatggtcctgtcaacactcccgatcgcatc
gtgttaatatctggtaaagaagaaccagaggcctacatgtcaccggcaatggacgcagtt
ttaagggtgtttagacgagtttcaggattgccagataatgatgatgatgatgttcaaaac
gctggaagtgccttctgttcagtgcgtttattagttgcatctacgcaggccataaatttg
attggaaaacagggatctttgattaagtcaatagtagagaactctggtgcatccgttcgt
attttatcagaagaggaaacaccgttttatgctgcacaggatgagaggatagtggatttg
cagggggaagctctaaagatcctcaaagcattagaagccattgttggacacttaaggaaa
tttctagtcgaccacactgtggtcccactcttcgagaagcaatatctagctagagtctct
caaactcgtcaggaagaaccgttagctgaaagcaagtcatctctgcatactatttcgtca
aatgtaatcgagcctgatttctccctcttagcacggagggatcctttgtttctggatcgc
gatgctcgggtggaatcacgtgttcagcctacgggagtttctatctacagtcaggatcct
gtactgtcagccagacactctccaggtcttgctcgggtttcttctgcttttgtgacacag
gtatctcaaacgatgcaaataccattctcctatgcagaggatatcattggtgtagaagga
gctaatatagcctacatccgtcgaagaagcggagctacaataaccattaaagagagtcca
catcctgatcaaatcacagtggaaatcaaaggcacatcttctcaagtacaaactgctgag
caattaattcaagagttcatcagcaatcacaaggaaccagtttcggtttcagggggatat
gccagaatcgacactggctatgtacctgcatatcctcctcagctaagtaaccgtcaagag
ccgctctcgaacagctacatgggcacagagacggtgcagtacagaccaacagcatactct
cagctggggggtccttcgacctacacgccgtccctgaatgggcaaacttatggttcggaa
tatagaccagcttctgatgttggtggctatagcagttataatctttga
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