Arabidopsis lyrata (lyrate rockcress): 9305741
Help
Entry
9305741 CDS
T01578
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9305741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9305741
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
SR proteins
9305741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
9305741
NCBI-ProteinID:
XP_002869670
UniProt:
D7MG01
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF
GRKGRRLRVEWTKSEREGDRRSGGGSRRSSSGMRPSKTLFVINFDADNTRTRDLERHFEP
YGKILNVRIRRNFAFIQYEAQEDATRALDATNNSKLMDKVISVEYAVKDDDARGNGHSPE
RRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKDRTSPDYGRRRSPSPYKKSRCG
SPEYGRDRRGNDSPRRRERVASPKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVDSPIV
RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSRSPPADE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtcttctgtgggaattttgagtatgatgcccgtgagggtgatctcgaacga
cttttcaggaaatacggcaaggttgagagggttgatatgaaagctgggtttgcttttgtg
tacatggaagatgaaagggatgcagaagatgccatccgagcccttgaccgtattgaattt
gggcgtaagggacgaagacttcgtgttgagtggacaaagagtgaacgtgaaggtgataga
agatctggtggtggttcaaggagatcctcatccggcatgagaccttccaaaactctcttt
gtgattaactttgatgcggataacactaggacccgggatctagagagacactttgagccg
tatggaaagatcctaaacgttaggatcaggaggaattttgcatttatccaatacgaggca
caagaggatgccacaagagcactggatgctacaaataacagtaagctgatggataaggtg
atctcagtggagtatgcggtgaaggatgatgatgctagagggaatggacacagtcctgaa
agacgccgtgataggtcacctgaaaggagaaggcgatcacctagtccttacaaaagagaa
agaggaagccctgattatggccgaggtgctagtcctgttgctgcatacagaaaggatagg
accagtcctgactatggccgtagacgtagcccaagtccttacaagaaatcaaggtgtggc
agtcctgagtatggtcgcgaccgcagaggcaatgatagtcctcgtaggagggagagagtt
gcaagccctaagtacagccgcagtcccaacaacaagagagagaggatgagccctaatcac
agcccgtttaagaaggaaagtccgagaaatggggttggtgaagttgatagtcccattgta
aggagggagagatcgaggtctagcccagagaatggccaagttgaaagccctggctcaata
ggaagaagagacagcgatggtgggtatgatggtgcagagagcccaatgcagaagagccgg
tctcgttcgccaccagctgacgagtga
DBGET
integrated database retrieval system
