Arabidopsis lyrata (lyrate rockcress): 9305783
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Entry
9305783 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9305783
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9305783
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9305783
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9305783
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9305783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
9305783
NCBI-ProteinID:
XP_020873252
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MLLVLDLGISTLVLVISLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASQEAARAELEAS
VEFSSVAISNIFHCPVCYCIATTRCSRCKSVRYCSGKCQIIHWRQGHKDECRPASIVYDS
EDEKSDSDLRFREENERNTLEETLLLDPQPVIIPIGETILSNPARSPEDGNGDIADNKDD
LIDKEEAVSVAETSGSSFSGFSSSPRNDSGDEISLCESFSSSESERSESLLDAHVSVEPE
DTCFSTIDDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPGGDTGQNQSQSRSLHSLVTD
RHPVSTDPSPLKSSDFWGTALGSAERVTESCDKSKSGRPGNSSLHFSFGSSRDTSAAKVS
EHKRSILKEAPSAALGTGNNLKERNAKIFDEAEIALPTSSSTDAPSPLDTSNLPHVTLQK
LKSASSENGCMLAPLKVGEVQLLASKASNTKECADLMKHSPLGAKSVRVLDHQKQNGAAV
HRISSLNGRSGLKASVLKVVDQWTRPKSENEMAGRHGHKGLFPYEVFAKLYTNKIEFQPC
GLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQCFTCGFEKLVLKAKEGKS
PLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMPKSSKLEDTTL
IGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGDNK
YRCGSCKSYERAKKKLKITDPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGS
EKSHDYKLYGVIVHLDIMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERIMTKGAYML
FYARCTPMPPKLAVCTKTEATNKRSRVPVPKAKEKSTISMSRSVSTSSPVLSSNTPGGRS
GNIQSFYSSFQRLQKILEDDSASDSSSLFDSNSDECSCSTDSTSMDDFADFIFGDHQGRA
HGQSEAPSPTSSSSSSSPPFTRHSPLSRSSLETYGTSRHQLPLGGER
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgctccttgttttggatctagggatttctactctagtccttgtgatctctcttgttctg
cctctgatcggcctctttgttcgtcacaaatggagggtcgctgcccaaaggagggaagag
attaggagacttcttattcatgcgtctcaagaggctgctagggctgagctagaggcctct
gttgagttctcttctgtggccatctctaatatcttccattgtcctgtgtgctattgtatt
gccacgactcgatgctctcgctgcaaatccgttcgatattgttccgggaaatgtcaaatc
attcactggcggcaaggtcacaaagatgaatgtcgtcctgcttccattgtatatgatagt
gaagatgagaaaagtgattctgatttgagattcagagaagagaatgaacggaatactctt
gaggaaactttactgctggatccacaaccagttattataccaatcggggaaacaatatta
tctaatcctgccagatctcctgaagatgggaatggagatattgcagataacaaagatgac
cttatagataaggaagaagctgtttctgttgctgaaacatctggatcctcgttttctggc
ttctcctcctccccccgtaatgactctggtgatgagatttctctttgtgagagctttagt
tcatctgaatccgagagatcagagtccctacttgatgctcatgtctctgtagagccagaa
gacacctgtttcagcaccatcgatgatgctccatccaaactgttgtctcctaaatttgtg
cacttggttgaatctgtagataacctcgctaatctgcctaaattaagtgtacataagcct
gggggtgatactgggcagaaccagagccaatcaaggagcttacactcattagttacggat
aggcacccagtatccactgacccatctcctctaaagtcatctgatttttggggtacggct
cttggatcagcagaacgtgtaactgagtcttgtgataaatctaaatctggtagacctggt
aactcctctctgcatttctcctttggctcctctagagacacctcagctgctaaagtttct
gagcacaaaaggagcattttaaaagaagctcctagtgctgcattagggactggtaataat
ctaaaagaaagaaatgctaaaatatttgatgaagctgaaattgccttaccaacttcctct
tctactgatgcgccgagtcctttggacacttctaatttgccccatgtgacccttcagaag
ttaaagagcgccagtagtgaaaatggctgtatgttggcccctttgaaggttggggaagtc
caacttttggcatccaaggcctcgaataccaaggagtgtgctgatcttatgaaacattct
cctctaggtgcaaaatctgtaagagttcttgatcatcagaaacagaatggtgctgccgtt
caccgtataagttctctaaatggaagaagtggtttgaaggcatcagtactgaaagttgta
gaccagtggactagaccgaagtctgaaaatgagatggcaggaagacatggtcataagggg
ctctttccatatgaagtctttgctaagctgtatacaaataaaattgagttccagccttgt
ggcctcatcaacgttggcaatagctgctttgctaatgttgtcttccaatgcctgatgttc
actcctcctctgacgacatacttcctccagcaacttcattctagagcatgtacaaaaaaa
gaacagtgcttcacctgtggatttgagaagctggtcttgaaggcaaaggaagggaagtct
ccactgtcccctaatggcttgctatctcagctacagaatattggaatctttcttgggaat
ggcaaggaagaagatgcacatgaattccttaggtttgttgtcgatacaatgcagtctgtg
tgcattaaggcatctgaatatgatatgcccaagagtagcaaattagaagatacaactctt
attggtttgacatttgggggttacctccgatcaaaaattaaatgcatgaaatgtcaagta
aaatctgagctgcgtgagaaaatgatggatctaacggttgagattgatggagatattagc
accctggatgatgctttgcgtcgatttacaaggactgagatattggatggagacaataaa
tacagatgtggcagctgtaaatcctatgagagagccaaaaagaagctgaaaattacagat
cctccgaatgtccttaccattgcactaaaacgattccaggcagggaaattcgggaagctc
aataagttgatcaggtttccagaaactctagatttggctccatatgtcagcgggggaagt
gaaaaatcacatgactacaaactctatggagttattgttcacttggatataatgaatgca
gcattttctggccactatgtctgctatattagaaatcaaaataagtggtataaggctgat
gatagcacggtagtaacttcggatgttgaaaggatcatgacaaagggagcgtatatgttg
ttctacgcaaggtgcactccaatgcctccaaaattagcagtatgcaccaaaactgaagca
accaacaaaagaagcagagtgccagtacctaaggctaaagagaaaagtaccatatccatg
tcacggtctgtgtctacttcaagtcctgttttgtcttccaacacgcccggtggtcgatca
ggcaatatacagtcattttattccagtttccagaggctgcagaaaattttagaagatgac
tcggcgagtgacagttcatctctctttgacagcaactcagatgaatgctcttgtagcaca
gacagtacaagcatggacgactttgctgatttcatttttggagatcatcagggacgggcc
cacggacagtctgaggctccctcaccaacatcatcgtcttcctcgtcttctcctcccttt
acaaggcattcgccgctcagtcgttcatctctagaaacttacggaacctcaagacatcag
ttgcccttgggaggagaaaggtaa
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integrated database retrieval system
