Arabidopsis lyrata (lyrate rockcress): 9305800
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Entry
9305800 CDS
T01578
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9305800
03036 Chromosome and associated proteins [BR:
aly03036
]
9305800
Spliceosome [BR:
aly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
9305800
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
9305800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
RRM_1
Lsm_interact
HAT_Syf1_CNRKL1_C
NRDE-2
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
9305800
NCBI-ProteinID:
XP_020873275
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMDDDTELVVSSSDQKMDDDASTENPAAPRPDPPSSDDSGESDSDSEDEAESNQQIQTLE
SELSANPYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLASS
ENVPEVVMLYERGLSDYQSVSLWCDYLSFLLEFDPSVRGYPSEGISKMRSLFERAIPAAG
FHVTEGNRIWEGYREFEQGVLATIDEADLEERNNQIQRIRSIFHRHLSVPLENLSSTLIA
YKAWELEQGIDLDIGSDDLSKVSHQVAAANKKAQQMYSERAHLEEHISNKDLSDTEKFQE
FMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTMYLDKTLKVGKAITHAYSRAT
RSCPWIGDLWARYLLALERGSASEKEIYAIFEKSLQCTFSSFEEYLDLYLTRVDGLRRRM
LSTRMVEALDYSLIKETFQQASDYLTPHMQNTDSLLHLHAYWANLELNIGKDLAGARGVW
DSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIFRRCYTRKFDGTGSEDICKGWLRFERE
HGDLEGFDLAVQKVMPRLEELQLIRLQQESTPVKPSAGLKEHNSQKSAGEKRKAEPNVEE
ESLAKRQKRKGQKEMDVGGQSATVPNTKNVKAENGKTADSNKEETEDAKPLKPKIYTDEC
TAFISNLSVKAQEEDIRKFFGDDGGVDSIRILHHKDTGKPRGLAYADFVDDEHLAAAIAK
NRKIFFGKKISIARSNPKKGKKEFTRRGNDGSGNSKEPSLISEKAKAPLGGEMEDVRQGN
EVEVRGKNTFTVPRQVKPLGYTTPKPSADETPKSNDEFRNMFLKK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgatgacactgaactcgtcgtcagtagcagcgaccagaagatggacgacgac
gcttctaccgaaaaccctgccgctccccgacctgatcccccctcgtcggatgattccggc
gagtctgattccgactcagaggatgaagccgagtcgaatcagcagattcaaaccctagag
tcggagctctccgccaatccttacaactacgatgcttatgtccaatacattaagcttctc
aggaaaacagccaaccttgaaaagctaagacaagcaagggaagctatgagtgccatattt
ccattgagtccttccttgtggctagaatgggcaagggatgaagcatctctagcctctagt
gagaatgtgcctgaagttgtgatgctttatgaacggggactttctgattatcagtctgta
tctctttggtgtgactacctgagctttttgctagaatttgatccatcagtacgtggatac
ccatctgaaggtatttccaaaatgcggagtctttttgaacgtgctattccggctgcaggc
ttccatgttactgaaggcaatagaatatgggaaggttatagagaatttgagcaaggcgtc
ttagccactatcgacgaggctgaccttgaggagagaaataatcagatacaaaggatcaga
agcatattccaccgtcacttgtctgttccactggaaaacttgagctccacccttattgct
tataaggcttgggagttggagcaaggcattgaccttgatattggatctgatgatttgagt
aaggtttctcatcaagttgctgctgcaaacaagaaggcacagcagatgtatagtgagcgt
gcccatcttgaagaacacatatctaacaaagatctatctgacacggaaaagtttcaagaa
ttcatgaattatataaagtttgagaagacttctggagatcctacccgagttcaagctata
tatgaacgtgctgtggctgaatatccggtttcaagtgacttgtggatagactacaccatg
tatcttgataaaactttgaaggttggaaaagctataacgcatgcctattctagggcgact
agaagttgcccatggattggagatctttgggcacgttatttgcttgctttagagcgtggt
tctgcatctgagaaagagatttatgctatctttgagaagtcattgcagtgtacattttcc
tcctttgaagagtacctggatttatacctcactcgagtagatggcctgagaaggagaatg
ttatcaactaggatggtagaggctctggattattctctgataaaagaaacttttcagcaa
gcatcagattacctaacgcctcacatgcaaaatacagacagtttgctacatttgcatgct
tattgggctaatttggaacttaatattggaaaagatctagctggagcacgaggtgtttgg
gatagctttttgaagaaaagtggtgggatgctagcagcctggcatgcatacattgatatg
gaagtgcatttggggcatataaaggaagctaggtctattttccggaggtgctatacaaga
aagtttgatggaactggctcagaagacatatgcaaaggatggttgcgctttgaaagggag
catggggatttggaaggttttgacctagcagttcaaaaggttatgccacgcttggaagag
ctacaattgatcaggttacaacaggagtctacaccagtcaaaccgtcagctggtctgaaa
gagcataactcacaaaagagtgcaggtgaaaagagaaaagcagaaccgaatgtagaagaa
gagtctttggctaagcggcagaagaggaagggtcaaaaagaaatggacgtaggtggtcag
agtgcaactgtaccaaacacaaaaaatgttaaagcagagaatggaaaaacagctgattca
aataaagaagagacggaagatgccaaacctctgaagccgaaaatttatacagacgagtgt
acagcttttatttcaaatctaagtgtcaaggcacaagaggaagatatacgtaagtttttt
ggcgatgatggtggggtggattccattcgcattctccatcacaaagacactggaaaacca
aggggactggcatatgctgattttgtggatgatgaacaccttgcagcagctatagcaaag
aacagaaagatattctttggtaagaagatcagtatagcacggtcaaatccaaagaagggt
aaaaaggaattcactaggcgtggaaatgatggttcagggaattcaaaggaaccctccctg
atttctgagaaggcgaaagcacctcttggtggagaaatggaggatgtaaggcaaggaaat
gaagtcgaggtgaggggtaagaacacgtttactgtcccaagacaagttaaaccactcggc
tacactacacccaaacccagcgcagatgagacgccaaaatcaaatgatgagttcaggaat
atgttccttaagaagtaa
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integrated database retrieval system
