Arabidopsis lyrata (lyrate rockcress): 9305850
Help
Entry
9305850 CDS
T01578
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
9305850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9305850
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Others
AP-1 complex
9305850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
HEAT_GCN1
Arm_2
XMAP215_CLASP_TOG
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
9305850
NCBI-ProteinID:
XP_020873266
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVA
NAVAALAEIQENSTGPIFEINSTTLTKLLTALNECTEWGQVFILDALSRYKAADPREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVITDDSNQLEPSLLDELLANISTLSSVYHKPPEAFVTRLKTTVQKTEDEDYVE
GSETGYPEASGNPVDGAASPPATTGYVPKSAAAPAPVPDLLGDLMGSDIAAIVPVDEPTA
PSGRPLPVVLPASKGQGLQISAQLTRQDGQVFYSMLLENNSQSLLDGFMIQFNKNSFGLA
AVGPLQVPPLQPGASARTMLPMVLSQNMSAGPTSSVLQVAVKNNQQPVWYFEDKIVLHAL
FSEDGRMERGTFLETWRSLPDSNEVQKEFSGITITSVESTLDLLAASNMFFIAKRKNGNQ
DVLYLSAKVPRGIPFLIELTAMVGQPGLKCAVKTPTPEIAPLFFEAVEILFKA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccatgattcgaaatacttttcgactacgaagaagggagagatccctgagctt
aaagaagagctgaattcacagtataaggataagaggaaagatgctgttaagaaggttatt
gcggcaatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgcatg
caaacagagaatctggagttgaagaagcttgtttatttgtatctgataaactatgccaaa
agccagccagatcttgctatccttgcagtaaatacttttgtaaaggattcacaagaccca
aatccattgatccgggctttggctgtgcgaacaatgggctgtattcgtgttgacaagatc
acagaatatctgtgtgaccctcttcagaaatgcctaaaggatgatgacccatatgtccgc
aagacagcagctatttgtgttgctaaattgtttgacataaatgcggaattagttgaggat
agggggttccttgaagccttaaaggatttaatatcagacaataatccaatggttgttgca
aatgctgtagcagcccttgcagagatacaagagaatagtactggtcccatatttgaaatc
aatagtaccaccctcacaaagctccttacagctttgaatgaatgtactgaatggggtcaa
gtatttatattagatgctttgtcgaggtataaggcagctgatcctcgtgaagctgagaat
attgttgagagagtcactccaaggttgcaacatgccaactgtgctgttgtgctttcagct
gtgaagatgatccttcagcagatggagcttattactagtacagatgtgattcgaaatctt
tgcaagaagatggctcctcccctagttacattgctttctgcagaacctgagatacagtat
gttgcacttcgtaacattaaccttattgtccaaaagagaccaactattcttgcccatgaa
atcaaggtgttcttctgcaagtataatgatccgatttatgtcaagatggagaagttagag
attatgataaaacttgcttctgacagaaacatagaccaggttcttctggagttcaaagaa
tatgccacggaagtagatgttgattttgttcggaaggctgtccgtgcaataggccgatgt
gctatcaaactagaaagagcagctgaacggtgcatcagtgttttacttgagctgatcaag
atcaaagtaaactatgttgttcaggaggccattatagtcatcaaagatatctttagaaga
tatccaaatacgtatgaatccatcattgcaacactctgtgagagtctagacacattggat
gaaccagaagctaaggcatctatgatttggatcattggtgaatatgctgaaagaatcgac
aatgcggatgaacttcttgaaagcttcctggagaatttccctgaggagccagcacaagtc
caactgcagcttcttacagctacagtcaaactatttctgaagaagccaactgagggccca
caacaaatgattcaggttgtcttgaataatgcaactgtagagacagataatcctgatctc
agggaccgtgcatacatctactggcgtcttctatctactgatcccgaggcggccaaggat
gttgttttagctgaaaagcctgtgattactgacgactcaaaccaacttgaaccgtcactc
ctggatgagctacttgcaaatatatccaccttgtcctctgtgtatcacaagccgccagag
gcttttgtaacccgcttgaaaaccacagttcagaaaacggaagatgaggattatgtagaa
gggagcgaaacaggatatcctgaggcatctggtaatccggttgatggtgcagcttcccct
ccagctaccacaggctatgtcccaaagtcagctgctgccccagctcctgtgcccgatctg
cttggtgacctaatggggtcagatattgctgcaatcgtccctgtagatgaacccacagct
ccgtcaggtcgcccgcttccagttgtcctgccagcatcaaagggtcaaggtctgcagatt
agcgctcaattaacccgacaagatggtcaagtattctacagtatgctcctcgagaacaac
tcacagtcacttcttgatggcttcatgattcagttcaacaaaaactcattcggccttgca
gctgttggacctcttcaggttccgcctctgcaacccggagcatctgccaggacaatgttg
ccaatggtattgtcccagaacatgtctgctgggcccaccagctcggttttgcaagttgcc
gtaaaaaacaaccagcagcctgtctggtactttgaggataagattgtacttcacgctctt
ttctcagaagatggtaggatggaacgtggaaccttcctcgagacatggagatcgttaccg
gattcaaatgaggtccagaaggaattctccgggataaccatcacgagcgtggagtcaaca
ctcgatttgctcgctgcatcaaacatgttcttcatagcaaaacgtaagaacggaaaccaa
gacgtgctgtatctttcagccaaggtaccgagaggcataccgttcttgatcgaactaacg
gccatggtgggtcaacctggtctgaaatgtgcagtcaagactccaacacctgagatcgct
cctctcttctttgaagccgtcgaaattctcttcaaagcttga
DBGET
integrated database retrieval system
