Arabidopsis lyrata (lyrate rockcress): 9305899
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Entry
9305899 CDS
T01578
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9305899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9305899
Spliceosome [BR:
aly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
9305899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
CDC45
Motif
Other DBs
NCBI-GeneID:
9305899
NCBI-ProteinID:
XP_020873410
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MKGEREVKNGVSEDEREVKRKRVMERSDSPPPPLGFNNPLLPLANAYDDDDEEDDNEQKK
SQTRGNGIAKGEGNGNKVRGEVVDDEDDDDDDDEASKGRGKHSRHVEVRRDCPYLDTVNR
QVLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVY
CLPDSYEINDPSLDDIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKT
EFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFL
QAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLKTSKDASSIIHKCFQGELEVVREYQG
NENKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLAR
MRYRITKSPPYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGEKVCS
KYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQ
DE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaagagaagttaagaatggtgtttctgaggacgagagagaggtgaagagg
aagagagtgatggaacggtctgattcaccacctccaccactcggtttcaacaatcctctt
ttgccgttggctaatgcttacgatgatgatgatgaggaagatgataacgagcagaagaaa
tcgcaaactcgtggtaatggaattgcgaaaggtgagggaaatggtaacaaagtgagagga
gaagtggtcgacgacgaagatgatgatgatgatgatgatgaagcttcgaaggggagggga
aagcattcacgccatgttgaagttcgtcgtgattgtccttatcttgataccgttaatcgt
caggtgttggattttgattttgagaggttttgctctgtctccttgtcaaatctgaatgtg
tatgcgtgtcttgtttgtgggaagtacttccaaggaagaagccagaagtctcatgcttat
acacatagcttggaagcaggacaccacgtttacatcaatcttctgacagagaaggtttat
tgtcttcctgatagttacgagatcaatgacccttctttggatgacattcgacatgtttta
aacccaaggtttagtagagcacaagtagaggagcttgacaagaataggcagtggtctagg
gctcttgatggctctgactatcttccgggaatggtggggctgaacaacatacaaaagaca
gagtttgtgaatgttacaatccagtcgttgatgagagttactcctttaaggaattttttc
ctcattcctgagaattatcagcattgcaagtcccctcttgttcaccgctttggggaacta
actcgcaagatttggcatgctcgaaactttaaaggacaggtaagtccacatgaattcttg
caagctgtcatgaaagccagcaagaaacgctttaggataggccaacagtcagatccagta
gagtttatgtcgtggctcctcaacactttgcacatggatcttaaaacttcaaaggacgcc
agcagtatcatccacaagtgcttccagggggagctggaggttgtgagagagtatcaaggc
aatgaaaacaaagaaatctccaggatgccttttctgatgctcgggctagatttgccaccg
cctcctcttttcaaagatgtcatggagaaaaacataattccgcaggttgctctattcgat
ttgttgaagaagtttgatggagaaactgtgacagaggtggttcgccctaagctggccaga
atgagatatcgtataacaaaatctcctccttacttgatgttccatatggttcggttcaag
aagaataacttcttcaaagagaagaaccctaccttggttaacttcccagtgaaggacatg
gagctgagggattacataccatcattgcctagagcaccagaaggcgagaaggtgtgttcg
aagtataatctaatcgcgaacattgtacatgatggtaagccggaggacgggtacttcaga
gtctttgtgcagcgcaagtcacaagaactatggtacgagatgcaggatcttcatgttgca
gagacacttccccagatggtggaactatcagaagcatacatgcagatttatgagcagcag
gatgaataa
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