Arabidopsis lyrata (lyrate rockcress): 9306008
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Entry
9306008 CDS
T01578
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9306008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9306008
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
9306008
Prokaryotic type
Archaeal type
TFE
9306008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Cas12f1-like_TNB
Bcr-Abl_Oligo
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
9306008
NCBI-ProteinID:
XP_020874252
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MEKSITVVQKTVVLEPFIKLVKLLVRIFYDNYTPESDNQQKSAKNVRGTAVIVLDALARR
QWVREEDLAKELKRNTKELRKLIRHFEEQKFVMRYHRKETAKRAKMYSYAVGGTTDGRAE
DNVKFHTHSYCCLDYAQIYDIVRYKLHRLKKKFKDELEDRNTVQEYGCPNCKRKYNALDA
LRLISMEDDSFHCENCNGELVMECNKLTSEEVVDGGDNARRRQREKVKVWLQDLEVELKP
LMELINRVKDLPFPAFEPFPAWEVRAAKAARENGDLNLNDPSRSLGGYGSTPMPFLGETK
VEVNLGEGKEDVKSKGGDSSLKMLPPWMIKQGMNLTEEQRGEMRQEANADGLSDDKKSVM
ENGDDNKDLKDEYLKAYYAAILEQQKLAAKLNQQESAGESTTTDIESATTSSDRQVGMKS
KREEEEEEDVEWEEQASVTANGNYKVDLNVEAEEAEEKEEEDDDDIDWEEG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcaatcacggtggtgcagaaaactgttgtgcttgagccgtttatcaagctg
gtgaagcttttagtaaggattttctatgacaattatactccggaaagcgataatcagcag
aaatctgcaaaaaatgtcagagggactgctgttatcgtgctggacgcgcttgcgaggcgg
caatgggttagagaagaagacttggcaaaagagttgaagcggaataccaaggaacttcga
aaattaataagacattttgaagaacaaaaatttgtcatgcgttaccacaggaaagagact
gcaaagcgtgcgaagatgtatagttatgcagtgggtggtacaactgatggccgagcagag
gacaatgttaagttccacacgcactcgtattgctgtcttgattatgcacagatatatgat
attgttcgttataaactgcaccggctcaaaaaaaaattcaaagatgaactagaagatagg
aatactgttcaggagtatggctgtcctaactgcaaaagaaaatataatgcactggatgcc
ctgagattaatttctatggaagacgattcttttcattgtgaaaattgcaatggtgaactt
gttatggaatgtaacaaactaacttccgaagaagtagtagatggaggtgacaatgcaagg
agacggcagcgggagaaagtaaaagtttggcttcaggatttggaggttgaactgaaacct
ctgatggaactaataaatagagtaaaagacctaccattccctgcctttgaaccttttccg
gcatgggaagttcgtgcagctaaggctgctcgtgaaaatggtgatcttaacttaaatgat
ccttcaaggtcactgggcgggtatggttcaacaccaatgccatttctgggagagacaaag
gttgaggttaaccttggtgaaggaaaagaagatgtcaaatcgaaaggtggagattctagt
ctgaaaatgttgcctccatggatgatcaagcaaggcatgaatctgaccgaggaacaaaga
ggagagatgagacaggaagcaaatgctgatggactttcagatgacaagaaatcagtcatg
gaaaatggcgatgataataaggatttgaaggatgagtatctcaaagcttactacgccgct
atactggagcagcaaaagcttgctgcaaaactgaatcagcaagaatccgcaggcgaatca
acaaccactgacattgaatcggctactacatcctcagatcgtcaggttggtatgaagtcc
aaacgcgaagaggaagaagaagaagatgttgaatgggaagaacaagcttctgtgacagca
aatggaaactacaaggtggatttgaatgtggaagcagaagaggcagaagaaaaagaagaa
gaagatgacgatgacatcgattgggaagaaggctga
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integrated database retrieval system
