Arabidopsis lyrata (lyrate rockcress): 9306057
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Entry
9306057 CDS
T01578
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9306057
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9306057
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
9306057
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
9306057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
9306057
NCBI-ProteinID:
XP_020874296
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MDSHPSQMGRSITNSNRSSLDLGRPSSSSSSSPSPLTKSISDASSQSLSSILNNPHGGKS
GVYGSDASWVGWWSSSTFVAPSEFAPVASTKLPGSELTRSDFHGYVSSISESHGRFEDIR
KHTREESSGFDQESHVSGLAACLREVPSLYFKEDFALEDGATFRSACPFSSLNENLALQE
KLSQYLDVVELHLVKEISVRSDSFFEAQGQLQDLNVKIVEGCSRIRELKETIRLLDRNLV
DSARQIQELSSTRINMLELQRKLRLILYVNQALSALKLLVASADCAGALDITDDLQNLLA
GDELTGLYCFRHLRDHVTSSIDSINSILTSEFMRISIHDTGEIDVLILSAAKIRGSISSN
GKTGEEVKLEEEDTSTLCDRLLPLVIGLLRTAKFPSVLRMYRDTLTSEMKNAIKKAVAEL
LPILVARSLESDFSHGERSVDVDGGGLSLASKLRTLSSEAFVNLLTAIFKIVQAHLVRAS
EVKKAIEWILCNIDGHYAADSVAAAIAVGAVAAETAQETGFQGGSLMSSPLGKATSKAPP
LQGKLSDASSLMNMSRNFRADVLRENTEAVFAACEVTHGRWAKLLGVRSLLHPKLKLPEF
MSIYDLTQEFITATEKIGGRLGSSIRGTLQSQAKAFVDSQHEARMTKLKAVLDQETWDEI
DVPEEFQSIISSLFASQQLISGKVDDADLKTYHSNRLPLNGSLTSGTGDQNTELRNQKSE
SSEGPAVSDAQVKSTVSPESLERSKAGVSSVTNNQSNQKAHGKSNLFYQGVGYHMVNCGL
ILLKMLSEYIDMNNSLPALSSEIVRRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKH
LALASQVIDFTYTIIPETRRILFSKVPETRKPLLSVEMDKVAQDYRIHRDEIYTKLVQIM
RERLLAHLHGLPKVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFR
QVISVIHTQTSQTLTNLEISSPEAKKRLKLHVELILKCIRSLPSDNANQSGIPNWGQLDE
YFEQHFKEEEAGEAE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggattcacacccttcccaaatgggaaggtccattaccaattcgaaccgatcgagctta
gatcttggtcgtccttcttcgtcttcgtcttcttctccttcaccgttaaccaaatcgatc
tccgatgcaagtagtcaaagtctctcttcgatccttaacaatccacatggaggtaagtct
ggtgtttatggttccgatgcttcttgggttggttggtggtcttcgtctacgtttgtagct
ccgtctgagttcgcgcctgttgcttcaacgaagctaccgggttcggagcttaccagatcc
gacttccatggctacgtttcttcgatctctgagtctcatggtaggtttgaggatattagg
aagcatacgagggaagagagctctgggtttgatcaggagagccatgtatcgggtttagct
gcgtgtttgcgtgaggttccttcgctttactttaaggaggattttgctcttgaggacgga
gctacatttcgttctgcttgccctttctcgagcttgaatgagaatctagcgcttcaagag
aagttgtcacagtatcttgatgtggtggagctgcatcttgtgaaggagatatctgttagg
tccgattcgttctttgaggctcaggggcagttacaggatttgaatgtgaagattgttgag
ggttgtagtaggattcgtgagttgaaagagactattcggctcttggacaggaatttggta
gattcagctcgacagattcaagagctgagctcaactaggattaatatgttggagctgcaa
cgtaaattgagacttattttgtatgttaaccaagctctctctgcactcaaattgcttgtt
gcgtccgcagattgtgctggagctttggatataactgacgatctccaaaacttgttggct
ggggatgagctaactggtctatactgcttccgccatcttcgggatcatgttactagttcc
atagattccataaacagtattctcacatcagaattcatgcgtatctccatacatgatact
ggggagatagatgtactgattttatctgcagcaaaaatacggggatccatttcatctaac
gggaagaccggtgaagaagttaagctagaggaagaggatacctctaccttatgtgatcgg
cttcttcctctagttattggattgctaagaacggcaaagttcccttcagttttgaggatg
tatcgtgatacactcacatccgaaatgaaaaatgcaatcaagaaagcagtagctgagctg
cttcccattcttgttgcaagatcgctcgaatctgatttttcacatggggagcgctctgta
gatgttgatggtggtggcttatctctcgcgagcaagttgaggactctgtcatctgaggca
tttgttaatctcttaactgctatatttaagattgttcaggcacatctagtccgggcttcg
gaagtgaaaaaagcaattgaatggattctctgcaatatcgatggacattatgccgctgat
tcagttgcagctgcaattgctgttggtgctgtagcggccgaaacagctcaggaaacaggt
ttccaaggtggatcattaatgtcttctccattgggtaaggctacctcaaaggcccctcca
ttgcagggaaaattgagtgacgcatcaagcttgatgaacatgtcgagaaacttcagggcc
gatgtcttgagagaaaacactgaagctgtctttgccgcttgtgaggttactcatggtagg
tgggcaaagctactaggagttcgctctcttcttcatccaaaattgaaattgccggagttc
atgagcatttatgatctgacccaagaatttataaccgctacggagaagattggtggaagg
ttgggatctagtattcgtgggacgctgcaatcacaagccaaagcctttgttgattcccag
catgaagctcggatgacaaaactaaaagctgtgcttgatcaagaaacatgggatgagata
gatgttcctgaagaattccaatccataatcagttctctttttgcatcccaacagttgatt
tctgggaaagttgatgatgctgatcttaaaacatatcacagtaatcggctccctctcaat
gggtctctcacttctggaactggggatcaaaatactgaattacgaaatcaaaaatctgaa
tctagtgaaggtcctgcagttagtgatgcacaagtgaaatccacagtctcacctgagtct
cttgaaagaagcaaggctggtgtatcttcagttacgaataatcaaagtaatcagaaggcc
cacggaaaatctaaccttttctatcaaggagttggttaccacatggtaaactgtgggtta
atattgctcaagatgttgtcagaatacattgatatgaacaattctttgccagctctgtcc
tcggaaattgttcgtcgtgttgttgaagtgttgagatttttcaacactcggacatgtcaa
cttgttctgggtgctggtgctatgcaggtatctggtttgaagtccataaaggcgaaacac
ttggcgcttgcaagtcaagtaattgacttcacttacactattattcctgaaaccagaaga
attctgttttcaaaagtacctgagacgagaaagcctctgttgtcagtagagatggataaa
gttgctcaggattatagaattcatcgagatgaaatatacacaaaactggttcagattatg
agagaaagactattggcgcatcttcatggtttgcccaaagttgttgagggctggaacaga
cctccagacaccaataaacaaactaaagagtttgcatggccactcacaagggaagttgga
taccttcaccgtgtgttgtctgagacattgcatgaagccgatgttcaagcaatcttcagg
caagtgatttcagttatccacacacaaacctctcaaacgcttacaaacttggagataagc
tctccagaggcaaagaaaaggctgaagcttcatgttgagctaatcctcaaatgtatccgg
tcgttaccatccgacaatgccaatcaatcaggcatcccaaactggggacaactagatgaa
tactttgaacaacactttaaagaagaagaagcaggcgaagctgagtga
DBGET
integrated database retrieval system
