Arabidopsis lyrata (lyrate rockcress): 9306086
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Entry
9306086 CDS
T01578
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9306086
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
Other 90S particles
9306086
Pre-60S particles
Other pre-60S particles
9306086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD_LRWD1
DUF3391
Motif
Other DBs
NCBI-GeneID:
9306086
NCBI-ProteinID:
XP_020874306
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MISALSWVPKGAAKAIPDRAKLPSKEEIEKLEESCEFYSEDEEEETDDEEENGDVAHAKA
IAKEFGKSSKSKNASSSSSSMEVDEVADGLKELDMDNYDEEDDGIEIFSSGLGDLYYASN
EMDPYLKNYQDDGDDSDDDSTILPTDSMIICARTDDKIKSPINCLDIYVCEETSNGSPNI
YSHQEILLPKPPMCTAWLDCPLKGGEKGNFVAVGLFKTHAIEIWDLDIMRELLPCVQLGG
KKKGKYREGSHTKSVIGLAWNKEFRNILASGSVDKQVKVWDVATETCQITLEHHTKGVQA
VAWNHYAPEVLLSGSFDRTVVLKDVRKPSHSGFKWSVISKVESLAWDPHSEYSFLVSLKD
GTVKGFDVRQASTSTSDSNPSFTLQHGRKAVTSISYNVSAPNLLATGSTDQSVKLWDLSN
NEPSCIATHRPNAGRLFSIAFSTDNPFLLAMGGLMGKLKVWDILSDTNVSSRYGSRQVRP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgataagtgcattgtcatgggtaccaaaaggggctgcaaaggccatacccgatcgtgct
aaacttccttctaaggaggaaatcgaaaagctcgaagagagttgtgaattttacagcgag
gatgaagaagaagaaaccgatgatgaagaagagaatggtgatgttgctcatgcaaaagca
atagcgaaagaatttggaaaatcttccaaaagcaagaatgcttcttcttcttcttcttca
atggaggttgatgaggtagctgatggtttgaaagaacttgacatggataattacgatgaa
gaggatgatggaattgaaatttttagctccgggcttggggatctttattacgccagtaat
gagatggatccatatctcaagaactaccaggatgatggtgatgactcggatgatgattca
acaattttaccaaccgattcaatgattatttgtgctaggaccgacgataaaatcaaatct
cctatcaactgtcttgatatttatgtatgcgaggagacatctaatggctctccaaacatc
tatagtcatcaggaaatattgctaccaaaacctccaatgtgtactgcttggcttgattgt
ccacttaaaggaggagaaaaagggaattttgtagcggttggtttgtttaaaacgcacgca
atagagatatgggatcttgacattatgcgcgagttgttaccctgcgtacaactaggagga
aaaaagaaagggaaatacagagaaggtagccatactaagtcagttattggtcttgcttgg
aacaaggagtttcggaatatacttgctagtggcagtgtcgacaaacaagttaaagtttgg
gatgttgctactgaaacatgccagattactctggagcatcacacaaagggggttcaagcg
gttgcttggaaccattatgctccggaagtacttcttagtgggtcatttgatcgcactgtt
gtattgaaagatgtaagaaagccttcacactcgggtttcaaatggtcagtcatttccaaa
gttgaaagcttagcctgggatccacatagcgaatactcctttttggttagtctcaaagat
ggaactgtcaagggttttgatgttcgtcaagcctcaacttcaacctctgattcaaatcca
agtttcactctccaacatggacgtaaagcagtcacttccatctcatacaacgtttctgca
cctaatcttttggcaactggatctacggatcaatcggtaaagctttgggatctttcaaac
aatgagccttcatgcattgctacacaccgaccaaatgctggacgcttattttccattgcc
ttctctacggacaatcctttcttactcgctatgggtggccttatgggcaagttaaaagtt
tgggatatactttcggacactaatgtctccagcagatacggaagcagacaagtccgacca
tga
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