Arabidopsis lyrata (lyrate rockcress): 9306088
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Entry
9306088 CDS
T01578
Name
(RefSeq) heat stress transcription factor A-4a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9306088
Transcription factors [BR:
aly03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
9306088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
Nup88
Suppressor_APC
CC_Bre1
AAA_8
PI3K_P85_iSH2
Carbpep_Y_N
DUF3450
CCDC39
CLZ
AAA_23
UPF0242
DUF2721
Uds1
Motif
Other DBs
NCBI-GeneID:
9306088
NCBI-ProteinID:
XP_020874725
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MDESNHGGTSSSLPPFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFK
HNNFSSFIRQLNTYGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSLPNLQAQQ
NPLTDSERLRMNNQIERLTKEKEGLLEELQKQDEEREVFERQVKELKERLQHMEKRQKTM
VSFVSQVLEKPGLALNLSPCVPETNERKRRFPRIGFFPDEPMLEDNQTCVVVREEGSTSP
SSHTTEHQVEQLESSIGIWENLVSDSCESMLQSRSMMTLDVDESSTCPQSPPLSCIQLSI
DTRPKSPPSQRIIDMNSEPDFSKEQNTVAAAPPPVAGANDVFWQQFFTENPGSTEQREVQ
SERKDDKDEAIRSEKCWWNSRNVNTITEQLGHLTSSERS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtaatcatggaggtacatcaagctcactcccacctttcctcaccaaaaca
tatgagatggttgatgattcttcatccgattctatcgtttcgtggagtcagagcaataag
agtttcatcgtttggaatccgccggagttttctagagatcttcttccgagattcttcaag
cacaataacttctcaagctttatccgtcagcttaacacatatggttttagaaaagctgat
cctgagcaatgggaatttgccaatgatgattttgtgagaggtcaacctcatcttatgaag
aacattcatagacgcaaaccagttcatagccactctttaccgaatcttcaagctcagcaa
aacccgttgacggattcagaacgactgagaatgaataatcagattgagagattgacaaaa
gagaaagaaggattgcttgaagagttacagaaacaagacgaggaacgagaagtgtttgag
aggcaagttaaagaacttaaagaacggttacaacacatggagaaacgtcagaaaacaatg
gtttcgtttgtttctcaagtattggaaaaaccagggcttgctttgaacctctcgccgtgt
gtacccgaaacaaacgagaggaaaagaaggttccctaggatcgggttctttcctgatgaa
ccgatgctggaagataaccaaacgtgtgttgttgtgagagaggaaggctctacaagcccg
tcttcacacacaacagagcatcaagtggaacagttagagtcatcgataggtatttgggag
aatcttgtatcggattcttgtgaaagtatgttacaatcaagaagcatgatgacacttgat
gtggatgaatcatctacttgcccacaaagccctcctctttcttgcatacagctaagtatc
gatacacgtcccaagtctcctccttctcaaaggatcatcgacatgaactctgagcccgat
ttttcgaaagaacagaacactgttgctgctgctcctcctccagtagcaggagcgaatgat
gtcttctggcagcagtttttcacagagaatcctggctcaaccgagcaacgggaagttcaa
tcagagaggaaagacgataaagatgaagccatacgtagtgagaaatgttggtggaattcg
aggaatgtaaatacaattacagaacagcttggacatctgacatcttcagagagaagttga
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