Arabidopsis lyrata (lyrate rockcress): 9306107
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Entry
9306107 CDS
T01578
Name
(RefSeq) replication protein A 14 kDa subunit B
KO
K10740
replication factor A3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
aly03420
Nucleotide excision repair
aly03430
Mismatch repair
aly03440
Homologous recombination
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9306107
03420 Nucleotide excision repair
9306107
03430 Mismatch repair
9306107
03440 Homologous recombination
9306107
03460 Fanconi anemia pathway
9306107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9306107
03400 DNA repair and recombination proteins [BR:
aly03400
]
9306107
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
9306107
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
9306107
MMR (mismatch excision repair)
9306107
DSBR (double strand breaks repair)
HR (homologous recombination)
9306107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
COG5_C
Motif
Other DBs
NCBI-GeneID:
9306107
NCBI-ProteinID:
XP_002870036
UniProt:
D7MCQ5
LinkDB
All DBs
Position
Unknown
AA seq
106 aa
AA seq
DB search
MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDIGSVIGKSTDDQQIVVKGSPNPPLTTY
IEVIGIAETENTIRAEVWTNFGDSFDAQNYNELCKLANGEFRHLFI
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcaagtcctgctgcttttgttaatggagctttgttgagacggtacattggt
cagaaagtgagagcagtgattcaagttattaggtcagatattggatcagtgattggtaaa
tcgactgatgatcaacagattgttgttaagggttcaccaaatccgcctttaactacttac
attgaggtaattggaattgctgagactgagaacaccattcgagctgaagtttggaccaac
tttggtgatagttttgatgcacaaaactacaatgaactatgtaagctcgcaaatggtgag
tttagacacttgttcatctaa
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