Arabidopsis lyrata (lyrate rockcress): 9306136
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Entry
9306136 CDS
T01578
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9306136
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
9306136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Fungal_KA1
Motif
Other DBs
NCBI-GeneID:
9306136
NCBI-ProteinID:
XP_020872369
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MHIEMENFRYLKIFSFIFVILLSSSEAETRVDKSSVFLVDIRSFGARANDHRDHTKAFVA
AWDKACKSSSSSVHFIIPRGEFSVGPLRFSGPCTNVSNLTVRVKGHLKASTDLSKYRSGG
AWIEFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISS
VNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIG
QGNSQITITSIKCGPGHGISVGSLGRYPNEKDVKGLVVKDCKISGTTNGIRIKTWANSPG
LSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSRVA
VQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSRNRGNEAVSSSCRNVRANYIGTQIPPP
CH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgagatggagaattttcgttacctgaaaattttctccttcatctttgtaata
ttattatcttcttctgaagcagaaaccagagtagacaaaagctctgttttccttgttgat
atccgtagctttggtgctcgagctaacgaccacagagaccacaccaaggcctttgtagca
gcatgggacaaggcatgtaaatcatcttcaagctctgtacattttataatcccaagaggt
gaattctctgttggtcctctcagattctctggtccttgcactaatgtatccaatctcact
gttcgagttaagggtcatcttaaggcatcaactgacctatcaaagtatagatcaggcggt
gcttggattgagtttggatggatcaatgggttaactcttactggaggtggaacatttgac
ggtcaaggcgccttagcttggccgtttaataactgtacttctgattctaactgcaaactc
ctcccaactagcttgaagtttgtggggatgaacagaacagtggtaagaaggataagctca
gtgaatagcaagttctttcatatagcattagtagagtgcagagacttcaaagggacaaga
ctcaacatcactgctccttctgatagtccaaatacagatggtatacatatcgaacgcagc
tcgaatgtgtatttctcgcgttcacatatcgcaactggagatgattgtgtctctatagga
caaggaaattctcagatcacaatcacaagtatcaaatgtggaccaggacatggtataagc
gttgggagtttagggagatatccaaatgagaaagatgttaaaggactggtggtgaaggat
tgcaagattagcggtacgacgaatgggataaggatcaaaacgtgggctaattctcctggt
ctaagtgctgctaccaacatgacttttgagaatattattatgaacaatgtgactaatcca
atcatcattgatcagtcttattgtcctttctcttcttgcatttcaaatgtaccttcgaag
gtggagctgagtgagatatacttcaagaatataagagggacatcatcttcacgggtcgcg
gtgcagctgcattgtagcagaggaatgccatgtaaaaaagtgtacttagagaatgttcat
cttgatctttcttcttctgatggaggaagaaaacagagcagaaacagaggaaatgaagct
gtctcttcttcttgtagaaacgttagagctaattacattggaactcaaatcccacctcca
tgtcactaa
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