Arabidopsis lyrata (lyrate rockcress): 9306150
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Entry
9306150 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9306150
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9306150
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9306150
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9306150
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9306150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
9306150
NCBI-ProteinID:
XP_020874662
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MLMANSDVSSSIIPNSIKTLDENESIQAHVVNVQSLALSSPNRDRGDDNNNHDSLSIPPP
IYDGYTSSSSDETQSVHSPINLDHDEFSNFPDSQTRIGTTSQALDDIDDDLWDACPSDDL
REAHRPWTPNVSPGFGSDDDDDNSKTESLRKSLFGFPQEPEPVTGVGAGLWNLGNTCFLN
SVFQCFTHTVPLIESLRAYKYEVPCHCGNEFFCVIRALRYHIEAALRPERCPIAPYYFLN
NLNYFSPDFQRYQQEDAHEFLQAFLEKLERCGSDRRSFHGNISSQDVFAGRLISGLRCCN
CNSVSETFEKSVGLSLEIEDADTLGSALESFTRVEKLDEQLTCDTCNEKVSKEKQMLLDK
LPLVATFHLKRFKTNGFFMEKIFKHVKIPLEIDLQPYMRNSQENEVSTKYHLYALVEHLG
YSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDRVLSQDSYILFYAREGTPWFSSAYEEL
QPLLEASLLNSSPKSVLDSSTNGECLSEISYENGDKSSKPCDSAGVSNEHVKTKEDFVSL
SNELTEDVFLSAESSSGEDSTMGELLDPLETVDSYSPCTENEPDSCLAIERATTVDDFFP
LLLDQNQELSSSPKQQEGTFQMQLSQIEEIAKSQEPWKQPLSSISNIADSMEAEFVNGDL
MKKPSPRARELLDQAISTTGSPPKKLKTT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgttaatggctaattccgacgtatcttcgtcgataattcccaactcgatcaaaacccta
gatgagaacgagtcgattcaagcacatgttgttaatgttcagtcattggctctttcgtcc
ccaaatcgagatcgcggcgatgataataataatcatgattcgctctcaattccgcctccg
atctatgatggttacacctcttcttcgtctgacgaaacccaatccgttcattctccgatc
aatttggatcacgatgagttcagcaattttccagactctcagactcgaattgggactact
tctcaagctctagacgatatcgacgatgatctctgggacgcgtgtccgtctgatgatctc
cgagaggctcacagaccttggactcccaatgtttcgcctggttttggaagcgatgatgat
gatgacaactctaaaaccgaatctcttcgcaaatccttattcggattcccgcaagaacct
gagcccgtgactggtgttggtgctggactttggaatctaggcaacacttgtttccttaat
tcggtgtttcaatgcttcactcatactgtgccacttatcgagagccttcgtgcttacaaa
tatgaagttccctgtcactgtggcaatgagttcttctgtgttataagggctcttcgatat
cacattgaggctgcattgaggcctgagagatgtccaattgctccctattattttcttaac
aatcttaattatttttcgcctgacttccagcgttatcaacaagaagacgctcatgagttt
ctgcaagcatttttggagaagttggagagatgtggttcggatagaagaagttttcatggc
aatatctcttctcaagatgtctttgctggtcgtctcatcagtggactccgttgctgcaac
tgcaactctgtctccgagacatttgaaaagtctgttgggttgagtttggaaattgaagat
gcggatacccttgggagtgcacttgaatcctttacccgtgtggagaaacttgatgagcag
ttgacatgtgatacctgtaatgaaaaagtttcaaaggagaagcaaatgttgcttgataag
ctccctttggttgctactttccatctgaagagattcaagactaatggattttttatggag
aagatctttaagcatgtcaagatcccattagagatagacttgcagccatatatgaggaat
agccaggaaaacgaagtttctacaaaataccatctttatgctcttgtggaacatcttggg
tattcagtagcttatggacattactcctcctatgtgagatccgctcctaagatatggcat
cactttgatgactcgaaggtcactagaatcgatgaagatagggtgctatcacaggattca
tatattcttttttatgcacgggaaggaactccctggttttctagtgcctatgaagagttg
cagccattgcttgaagcgagtttactaaattcttccccaaagtctgtgcttgattcttct
actaacggggagtgtttatcagagatcagttatgagaatggcgataaatcaagcaaaccc
tgcgattctgctggagtgtctaacgaacatgtcaagacaaaagaagattttgtttccctc
tctaatgagctaaccgaagatgtgtttctatcagcagagtcttctagtggcgaggattct
actatgggagagcttttggacccgcttgagactgttgattcttacagtccatgcactgag
aatgaaccagattcttgtttagccattgaaagagcaaccactgttgatgatttttttcct
ctgctcctggatcaaaatcaagagttgtcgtcgtctccaaaacagcaagaaggaactttt
caaatgcagctctcgcaaatcgaagaaatcgcaaagagccaagaaccttggaagcagcca
ttatcatcaataagcaacattgcagattccatggaagcagaatttgtgaatggagacctc
atgaagaaaccttcacctagggctagagagttgttggatcaagccatttctacaactggt
tctccacccaaaaagttaaaaacaacatga
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integrated database retrieval system
