KEGG   Arabidopsis lyrata (lyrate rockcress): 9306300
Entry
9306300           CDS       T01578                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9306300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9306300
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9306300
 Complex B
    9306300
 Complex C
   U2 SnRNP specific factors
    9306300
SSDB
Motif
Pfam: Surp ubiquitin UN_NPL4 ARM_KNTC1_3rd Mannosyl_trans
Other DBs
NCBI-GeneID: 9306300
NCBI-ProteinID: XP_020872663
LinkDB
Position
Unknown
AA seq 395 aa
MSENNDDTYQGHDLKTIIERTAEFIAKNGAEYEKEFLESHPKLTFFVSSDPNHAFYQDKL
IEYRNASHDHNATDDDSDDNVESSKIIPPPPGGVTNRIQGTALYVAKKGFKAGKMLMQSE
ANNPKYNFMRRSDPYHAFYKQKLAEYRSQVDDDSTNSDDITDEEVVAAARLSVAQAEYIF
LPNRLLICLPHGMRIEEFNTMKLTAQFVAWYGGAFWLCLKNRKILPKFEFLEQSAKWYSC
FSKFVLEFSKVLMPPADVKQELINSADYVTTIVDAFLQRLQWSALQHQLWTLRNQIQRDK
SCKSQPLFQKTLAQNPGSSTIKVSVPNAGGGGKVIEIIVQSLSENVASLKEKIAEEIQVP
ANTHKLSGKAGVLDDDNKSLAHYNVGVGDTLTLSL
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtccgagaataatgatgatacatatcaaggtcatgatctcaaaactatcatcgagaga
acagcagaattcattgccaaaaacggggctgagtatgagaaggagttcttggagtcgcat
ccaaaactcaccttttttgttagctcagatcctaatcacgcattttaccaggacaagctt
attgaataccgaaacgcatctcatgatcataatgctactgatgatgattctgatgataat
gttgaaagtagcaaaatcattccgccacctccaggtggtgtcacaaatcgtatccaagga
acagcactttacgttgccaaaaagggtttcaaggctgggaagatgctcatgcaatctgaa
gccaacaatccaaaatacaactttatgagaagatcagatccttatcacgcattttacaag
cagaagctcgctgaataccgttctcaagtggatgatgattctactaattcagatgatatt
actgatgaagaagtggttgctgcagcacgactcagtgttgctcaggctgagtatatattc
ctgcctaatcgactacttatttgtcttcctcatgggatgagaatcgaggagtttaatact
atgaagctcacagcacagtttgtggcgtggtatggtggtgctttttggttgtgtttgaaa
aatagaaagattcttcctaagtttgagtttttggaacaaagtgctaaatggtactcatgt
ttctctaagtttgttcttgagttttccaaagtactaatgcccccggcagatgtgaaacaa
gagctgattaatagtgctgactatgtgactaccattgttgacgcttttctccaacgtctt
caatggagtgctctccagcaccaactatggaccttgaggaaccagatccaaagagacaaa
agttgcaagagtcagcccttgttccagaagactcttgctcaaaatccgggctcgtctaca
atcaaggtttctgttccaaatgctggtggtggtgggaaagtcattgagatcatagtgcag
tcgttatcggaaaacgtggcaagtttgaaggagaaaatagctgaggagatccaagttcca
gcaaacacacacaagttaagtggaaaagctggagttttagacgacgacaacaagtcactt
gcacattacaatgttggagtaggagataccctaacactgtctctgtga

DBGET integrated database retrieval system