KEGG   Arabidopsis lyrata (lyrate rockcress): 9306530
Entry
9306530           CDS       T01578                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9306530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9306530
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9306530
Ubiquitin system [BR:aly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   9306530
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   9306530
  Exosomal proteins of other body fluids (saliva and urine)
   9306530
  Exosomal proteins of colorectal cancer cells
   9306530
  Exosomal proteins of bladder cancer cells
   9306530
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Dsc3_N Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 UBL_UBAC1 OTU1_UBXL
Other DBs
NCBI-GeneID: 9306530
NCBI-ProteinID: XP_002870459
UniProt: D7MHY1
LinkDB
Position
Unknown
AA seq 537 aa
MVLMQIFARTLTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLA
DYNIQKESILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQ
RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN
VKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT
GKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL
VLRLRGGMQIFVKTLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDG
RTLADYNIQKESTLHLVLRLCGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP
PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD
TIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggtactgatgcaaatcttcgcaaggactctaacagaaaaaaccataacccttgatgct
gaaagttcctacaccatcaataacgtcaaggcacagatccaagacaaagaagggattcct
ctagaccagcaacggcttatctttgccggtaaacaactcgaggatggccgtactttggct
gattacaatattcaaaaggagtcaattctccacttggcccttaggttgagaggtggtatg
cagatcttcgtcaagactcttactggcaagaccataactcttgaggtcgaaagctccgac
acaattgacaatgtcaaggcaaagatccaagacaaggaaggaatcctgccggaccagcag
agacttatctttgccggtaaacaacttgaggacggtcgtactttggctgattacaatatt
cagaaggagtcaaccctccacttggttcttaggttgagaggtggcatgcaaatctttgtt
aagactcttacagggaagacgataacccttgaggtcgaaagctcagataccatcgataac
gtcaaggccaagatcgaagacaaggaaggaatccctacggaccaacagagacttatcttc
gccggtaagcagctcgaggatggccgtactcttgctgattacaacatccagaaggagtca
acccttcatcttgtacttcgtcttcgcggtggcatgcagatctttgtgaaaaccctcact
ggcaaaaccataactttggaggttgagagctcagacacaattgacaatcttaaagctaag
attcaagataaggaagggatccctccggaccagcagagacttatctttgccggtaagcag
cttgaggacggtcgcacccttgcagattacaacattcagaaggagtcgacccttcacctt
gtccttcgtcttcgcgggggcatgcaaatatttgtgaaaacccttactggcagaaccatt
accctagaagttgagagctcagacaccattgacaatgtgaaagctaagattcaagataag
gaagaaatccctgcggaccagcagagacttatcttcgctggcaagcaacttgaggatggt
cgaaccctagcagattacaacatccagaaagaatcaactctccatttggttcttcgtctt
tgcggtgggatgcagatatttgtgaaaactcttaccggtaaaaccattactctagaagtt
gagagctcagacaccattgacaacgtgaaagctaagattcaagacaaagaaggaatccct
ccggaccaacagagacttatcttcgctggcaagcaacttgaggatggtcgcacccttgcg
gattacaacatccaaaaggagtcaacactccaccttgtgttgcgtcttcgtggtgggatg
cagatttttgtcaagactttgacgggcaagaccatcacacttgaggtcgagagctctgat
acgattgacaacgtaaaggccaagattcaggacaaagaagggatagttccggaccagcag
aggctaatctttgccggaaaacagctcgaggatggtcgtactttagcggattacaatatt
cagaaagagtcgactcttcaccttgttctccgtctccgtggaggaagcttctga

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