Arabidopsis lyrata (lyrate rockcress): 9306649
Help
Entry
9306649 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9306649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9306649
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9306649
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
9306649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
DUF1644
Motif
Other DBs
NCBI-GeneID:
9306649
NCBI-ProteinID:
XP_020872358
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MVGASRLEDLWNEENRSQKRHRSSLSSGDGRKIVDKRRSAMLTDLQILDCPICYEALTIP
IFQCVNGHLACSSFCPXLRNKCPACALPVGHIRCRAMESVLESVLVPCQNANLGCTKTHE
KYCYFSSCSCPIQVCNYTGSYKDLYEHYDRTHQISSANDRFRCGVSYMAVMMFISXKILI
IRVYEKKLLFAVQCFEEPFGVYVTVSCIAPSAPEVGEFSYHLSYTTEDEHTMTYQSPKVK
KVLKVSSQRPKESSILIPHNLIRYQLLIMKLCINELKQE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagcctcccgtttggaagatttatggaacgaagagaatagatctcaaaagaga
caccgttcttctctatcttccggtgatggaagaaagatagttgataagagacgctcagcg
atgctgacggatcttcagattcttgattgtcccatttgctacgaagcattgacgattcct
atatttcagtgtgttaatggacatttggcttgttcttctttctgtccanaactgagaaat
aaatgtcctgcatgtgctttgcctgttggacatattcgctgtagagcaatggagagtgtt
cttgaatcagttttggtcccatgccaaaacgcaaatttaggttgcaccaagacccatgag
aagtattgctacttctcttcatgctcctgccctatacaagtttgcaattatactggctca
tacaaggacctatacgagcactatgatcgtactcaccaaataagcagcgcgaatgatagg
ttcagatgtggcgtttcctatatggccgtgatgatgttcatcagctaaaagatactaatt
ataagggtatatgagaagaaactattgtttgcagtgcaatgtttcgaggagccatttggt
gtttatgtaactgtaagctgcattgcaccatctgctccagaagtaggagagttctcatat
catctctcctacactactgaggatgaacacactatgacttaccaatcaccaaaggtgaaa
aaggttcttaaagtgagctcccaaagacctaaagagagttccatattgatccctcacaat
ttgatacgttatcaattgttaattatgaagctttgcatcaatgagttgaagcaagagtaa
DBGET
integrated database retrieval system
