KEGG   Arabidopsis lyrata (lyrate rockcress): 9306770
Entry
9306770           CDS       T01578                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9306770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9306770
   03041 Spliceosome [BR:aly03041]
    9306770
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     9306770
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     9306770
Spliceosome [BR:aly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    9306770
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 RRM_Nup35 SF3a60_bindingd
Other DBs
NCBI-GeneID: 9306770
NCBI-ProteinID: XP_020874714
LinkDB
Position
Unknown
AA seq 404 aa
MERKQLSKMKSTMLNHPKILKTMTTNLSLTLVVASIVLAEFLKHFGKYGEITDSVIMKDR
KTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGI
PASVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELS
GTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYGDGYGDGYGDGYGGPGGPYKSGGGG
YGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGGYNRGGYGMGG
GGGYGGGPGDMYGGPYGEPGGGYGGPSGSYGGGYGSSGIGGYGGAGGGGYRGGGGYDMGG
VGGGGAGGYGAGGGGNGGGSFYGGGGGSRGGYGGGSGRYHPYGR
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggaacggaaacagttatcgaagatgaaatccacgatgctaaaccatccgaagatattg
aagacgatgacgacaaatctcagcctcactctggtggtggcgtcgatagtgctggctgaa
ttcctcaagcattttgggaaatatggagagatcactgattctgtgattatgaaggatagg
aaaactggacagccccgaggatttgggtttgtgacatatgctgattcctctgtggtcgac
aaagttatccaagacaatcacattataattggcaagcaggttgaaattaagcggacgata
ccaagaggatccatgagctctaacgatttcaaaactaaaaagatatttgttggtggaatt
cctgcttctgtagatgatgatgagttcaaggaattctttatgcaatttggagagctgaag
gaacatcagattatgcgtgatcactcaactggaagatcacgtggctttgggtttgttaca
tatgaaagtgaagatatggttgatcatctcttggcaaaagggaacagaattgagctctca
gggactcaggtagagataaagaaggcggagccaaaaaaaccaaactcagttacaaccccg
tcaaagcggtttggtgattctcgctctaactttggtggaggttatggagatggttatgga
gatggttatggagatggttatggtggtccaggtggtccttacaaatcaggtggtggcggt
tatggaggtggccggtctggtggttatggagggtacggaggagaattcggcgggtatggt
ggtggtggatatggtggtggcgtgggaccttatagaggagaaccagcacttggatattct
ggtcgttatggaggaggaggcggcggtggttacaacagaggtggttatggcatgggagga
ggcggagggtacggtggtgggccgggtgatatgtatggtgggccatacggtgaacctgga
ggtggttacggtggaccaagtggcagttatggaggtggatatggcagtagcggcattggt
gggtatggtggtgctggtggcggaggctatagaggaggtggtggctatgatatgggtgga
gttggaggtggaggcgcaggaggatacggtgctggtggtggcggaaacggtggaggctca
ttttatggaggaggaggaggaagtagaggtggatatggaggcggcagtggacggtaccat
ccttatggaaggtag

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